Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.41□□□□□ -0.26
AP1S2P56377 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.41□□□□□ -0.26
AP1S2P56377 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.41□□□□□ -0.26
AP1S2P56377 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.41□□□□□ -0.26
AP1S2P56377 AC234782.1-201ENST00000451950 919 ntBASIC13.41□□□□□ -0.26
AP1S2P56377 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC13.41□□□□□ -0.26
AP1S2P56377 CEP164P1-201ENST00000455142 418 ntBASIC13.41□□□□□ -0.26
AP1S2P56377 NDUFS6P1-201ENST00000485187 316 ntBASIC13.41□□□□□ -0.26
AP1S2P56377 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.41□□□□□ -0.26
AP1S2P56377 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
AP1S2P56377 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 OR5BD1P-201ENST00000532527 817 ntBASIC13.41□□□□□ -0.26
AP1S2P56377 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.41□□□□□ -0.26
AP1S2P56377 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
AP1S2P56377 FGFR3P5-201ENST00000564496 886 ntBASIC13.41□□□□□ -0.26
AP1S2P56377 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.41□□□□□ -0.26
AP1S2P56377 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.41□□□□□ -0.26
AP1S2P56377 MIR2392-201ENST00000584881 84 ntBASIC13.41□□□□□ -0.26
AP1S2P56377 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.41□□□□□ -0.26
AP1S2P56377 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.41□□□□□ -0.26
AP1S2P56377 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.41□□□□□ -0.26
AP1S2P56377 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.41□□□□□ -0.26
AP1S2P56377 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.41□□□□□ -0.26
AP1S2P56377 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.41□□□□□ -0.26
AP1S2P56377 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
AP1S2P56377 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
AP1S2P56377 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
AP1S2P56377 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
AP1S2P56377 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 AC026271.4-201ENST00000578214 1833 ntBASIC13.41□□□□□ -0.26
AP1S2P56377 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
AP1S2P56377 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
AP1S2P56377 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.4□□□□□ -0.26
AP1S2P56377 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 DDC-212ENST00000615193 1674 ntTSL 3 BASIC13.4□□□□□ -0.26
AP1S2P56377 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.4□□□□□ -0.26
AP1S2P56377 AC019294.4-201ENST00000561777 2905 ntBASIC13.4□□□□□ -0.26
AP1S2P56377 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
AP1S2P56377 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.4□□□□□ -0.26
AP1S2P56377 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
AP1S2P56377 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.4□□□□□ -0.26
AP1S2P56377 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 AC005077.3-201ENST00000449614 213 ntBASIC13.4□□□□□ -0.26
AP1S2P56377 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.4□□□□□ -0.26
AP1S2P56377 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.4□□□□□ -0.26
AP1S2P56377 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.4□□□□□ -0.26
AP1S2P56377 KRT8P2-201ENST00000556193 944 ntBASIC13.4□□□□□ -0.26
AP1S2P56377 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.4□□□□□ -0.26
AP1S2P56377 AC097724.1-201ENST00000609581 426 ntBASIC13.4□□□□□ -0.26
AP1S2P56377 AC007718.1-201ENST00000621078 280 ntBASIC13.4□□□□□ -0.26
AP1S2P56377 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.4□□□□□ -0.26
AP1S2P56377 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.4□□□□□ -0.26
AP1S2P56377 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
AP1S2P56377 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
AP1S2P56377 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC13.4□□□□□ -0.26
AP1S2P56377 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.4□□□□□ -0.26
AP1S2P56377 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.4□□□□□ -0.26
AP1S2P56377 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
AP1S2P56377 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
AP1S2P56377 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.4□□□□□ -0.26
AP1S2P56377 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.4□□□□□ -0.26
AP1S2P56377 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
AP1S2P56377 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms