Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
TNFSF9P41273 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFSF9P41273 MIR497HG-202ENST00000572453 3838 ntBASIC14.79□□□□□ -0.04
TNFSF9P41273 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF9P41273 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF9P41273 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF9P41273 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TNFSF9P41273 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TNFSF9P41273 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFSF9P41273 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 AC008040.5-201ENST00000599781 1781 ntBASIC14.78□□□□□ -0.04
TNFSF9P41273 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFSF9P41273 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TNFSF9P41273 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.78□□□□□ -0.04
TNFSF9P41273 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TNFSF9P41273 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFSF9P41273 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TNFSF9P41273 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TNFSF9P41273 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 PSAT1P2-201ENST00000426107 972 ntBASIC14.78□□□□□ -0.04
TNFSF9P41273 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 RN7SL396P-201ENST00000471086 295 ntBASIC14.78□□□□□ -0.04
TNFSF9P41273 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.78□□□□□ -0.04
TNFSF9P41273 RPL29P2-202ENST00000498671 657 ntBASIC14.78□□□□□ -0.04
TNFSF9P41273 TREHP1-201ENST00000531328 465 ntBASIC14.78□□□□□ -0.04
TNFSF9P41273 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFSF9P41273 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFSF9P41273 AC006158.1-201ENST00000610661 249 ntBASIC14.78□□□□□ -0.04
TNFSF9P41273 AC026336.4-201ENST00000624565 1050 ntBASIC14.78□□□□□ -0.04
TNFSF9P41273 Z82244.1-201ENST00000631502 840 ntBASIC14.78□□□□□ -0.04
TNFSF9P41273 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFSF9P41273 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TNFSF9P41273 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFSF9P41273 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFSF9P41273 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFSF9P41273 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TNFSF9P41273 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF9P41273 MSNP1-201ENST00000511640 1732 ntBASIC14.78□□□□□ -0.04
TNFSF9P41273 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TNFSF9P41273 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF9P41273 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF9P41273 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF9P41273 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF9P41273 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.77□□□□□ -0.04
TNFSF9P41273 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF9P41273 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF9P41273 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TNFSF9P41273 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TNFSF9P41273 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFSF9P41273 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF9P41273 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF9P41273 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF9P41273 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF9P41273 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TNFSF9P41273 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF9P41273 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFSF9P41273 U3.5-201ENST00000363448 216 ntBASIC14.77□□□□□ -0.05
TNFSF9P41273 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
TNFSF9P41273 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
TNFSF9P41273 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF9P41273 AP000354.1-201ENST00000396982 456 ntBASIC14.77□□□□□ -0.05
TNFSF9P41273 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFSF9P41273 AL627389.1-201ENST00000413508 1182 ntBASIC14.77□□□□□ -0.05
TNFSF9P41273 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFSF9P41273 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFSF9P41273 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFSF9P41273 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFSF9P41273 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFSF9P41273 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFSF9P41273 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFSF9P41273 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFSF9P41273 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TNFSF9P41273 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFSF9P41273 AC104212.2-201ENST00000478813 628 ntBASIC14.77□□□□□ -0.05
TNFSF9P41273 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFSF9P41273 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
TNFSF9P41273 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.77□□□□□ -0.05
TNFSF9P41273 AC008972.2-201ENST00000606587 494 ntBASIC14.77□□□□□ -0.05
TNFSF9P41273 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFSF9P41273 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF9P41273 HLA-C-210ENST00000640219 976 ntBASIC14.77□□□□□ -0.05
TNFSF9P41273 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFSF9P41273 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF9P41273 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFSF9P41273 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF9P41273 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF9P41273 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TNFSF9P41273 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms