Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
APOBEC1P41238 AC074138.1-201ENST00000611182 1303 ntBASIC12.44□□□□□ -0.42
APOBEC1P41238 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.44□□□□□ -0.42
APOBEC1P41238 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.44□□□□□ -0.42
APOBEC1P41238 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.44□□□□□ -0.42
APOBEC1P41238 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.44□□□□□ -0.42
APOBEC1P41238 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.44□□□□□ -0.42
APOBEC1P41238 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.44□□□□□ -0.42
APOBEC1P41238 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.44□□□□□ -0.42
APOBEC1P41238 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.44□□□□□ -0.42
APOBEC1P41238 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
APOBEC1P41238 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.44□□□□□ -0.42
APOBEC1P41238 AL031713.1-201ENST00000564813 661 ntBASIC12.44□□□□□ -0.42
APOBEC1P41238 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.44□□□□□ -0.42
APOBEC1P41238 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.44□□□□□ -0.42
APOBEC1P41238 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.44□□□□□ -0.42
APOBEC1P41238 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
APOBEC1P41238 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.44□□□□□ -0.42
APOBEC1P41238 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.43□□□□□ -0.42
APOBEC1P41238 PTPRVP-205ENST00000641549 5067 ntBASIC12.43□□□□□ -0.42
APOBEC1P41238 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
APOBEC1P41238 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.43□□□□□ -0.42
APOBEC1P41238 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 AL122018.1-201ENST00000446607 2310 ntBASIC12.43□□□□□ -0.42
APOBEC1P41238 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 AC073210.1-201ENST00000414799 232 ntBASIC12.43□□□□□ -0.42
APOBEC1P41238 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.43□□□□□ -0.42
APOBEC1P41238 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
APOBEC1P41238 RN7SL375P-201ENST00000492442 298 ntBASIC12.43□□□□□ -0.42
APOBEC1P41238 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.43□□□□□ -0.42
APOBEC1P41238 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.43□□□□□ -0.42
APOBEC1P41238 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.43□□□□□ -0.42
APOBEC1P41238 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 AC138894.2-201ENST00000602838 371 ntBASIC12.43□□□□□ -0.42
APOBEC1P41238 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.43□□□□□ -0.42
APOBEC1P41238 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
APOBEC1P41238 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
APOBEC1P41238 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
APOBEC1P41238 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms