Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04436 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04436 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04436 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.56□□□□□ -0.4
P04436 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
P04436 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P04436 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04436 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04436 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04436 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.56□□□□□ -0.4
P04436 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04436 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.56□□□□□ -0.4
P04436 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04436 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.56□□□□□ -0.4
P04436 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
P04436 AL358781.1-202ENST00000321081 1360 ntBASIC12.56□□□□□ -0.4
P04436 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04436 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P04436 AC092115.1-201ENST00000566277 1402 ntBASIC12.55□□□□□ -0.4
P04436 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.55□□□□□ -0.4
P04436 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P04436 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P04436 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P04436 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.55□□□□□ -0.4
P04436 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
P04436 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P04436 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.55□□□□□ -0.4
P04436 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC12.55□□□□□ -0.4
P04436 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.55□□□□□ -0.4
P04436 BCAS2P2-201ENST00000425064 674 ntBASIC12.55□□□□□ -0.4
P04436 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC12.55□□□□□ -0.4
P04436 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.55□□□□□ -0.4
P04436 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.55□□□□□ -0.4
P04436 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.55□□□□□ -0.4
P04436 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.55□□□□□ -0.4
P04436 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
P04436 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.55□□□□□ -0.4
P04436 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC12.55□□□□□ -0.4
P04436 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 AC020917.4-201ENST00000623994 1999 ntBASIC12.55□□□□□ -0.4
P04436 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.55□□□□□ -0.4
P04436 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
P04436 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
P04436 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P04436 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.55□□□□□ -0.4
P04436 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.55□□□□□ -0.4
P04436 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.55□□□□□ -0.4
P04436 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.55□□□□□ -0.4
P04436 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04436 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms