Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AC005632.3-201ENST00000605544 308 ntBASIC14.05□□□□□ -0.16
CAPN8A6NHC0 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN8A6NHC0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 AC078991.1-201ENST00000437297 610 ntBASIC14.04□□□□□ -0.16
CAPN8A6NHC0 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 RN7SL81P-201ENST00000493781 261 ntBASIC14.04□□□□□ -0.16
CAPN8A6NHC0 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 ORAOV1P1-201ENST00000503108 395 ntBASIC14.04□□□□□ -0.16
CAPN8A6NHC0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 AC138701.2-201ENST00000553634 226 ntBASIC14.04□□□□□ -0.16
CAPN8A6NHC0 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 AC132825.4-202ENST00000578792 434 ntBASIC14.04□□□□□ -0.16
CAPN8A6NHC0 AC087045.2-201ENST00000606279 1003 ntBASIC14.04□□□□□ -0.16
CAPN8A6NHC0 FO393412.1-201ENST00000619841 382 ntBASIC14.04□□□□□ -0.16
CAPN8A6NHC0 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 SALL4P6-201ENST00000429385 1691 ntBASIC14.04□□□□□ -0.16
CAPN8A6NHC0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CAPN8A6NHC0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 PYY2-201ENST00000315776 282 ntBASIC14.03□□□□□ -0.16
CAPN8A6NHC0 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 ERP29P1-201ENST00000442902 706 ntBASIC14.03□□□□□ -0.16
CAPN8A6NHC0 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 CHCHD2P9-201ENST00000461726 456 ntBASIC14.03□□□□□ -0.16
CAPN8A6NHC0 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CAPN8A6NHC0 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms