Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 MIR632-201ENST00000385193 94 ntBASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 RNU1-80P-201ENST00000459500 161 ntBASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 NDUFB2P1-201ENST00000506966 295 ntBASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 PHBP18-201ENST00000546648 813 ntBASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 METTL7AP1-201ENST00000547343 496 ntBASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 MIR5091-201ENST00000578707 93 ntBASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 AC123912.6-201ENST00000612657 315 ntBASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.21□□□□□ -0.13
DNMT3BQ9UBC3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.21□□□□□ -0.14
DNMT3BQ9UBC3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 AIG1-203ENST00000367596 559 ntTSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 KRT8P30-201ENST00000432100 650 ntBASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 RPSAP70-201ENST00000504462 864 ntBASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 OR4A49P-201ENST00000527050 632 ntBASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 PIGCP1-201ENST00000527583 895 ntBASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 AC010202.1-201ENST00000551181 405 ntBASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
DNMT3BQ9UBC3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms