Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 ALG1L6P-201ENST00000515248 758 ntBASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 MIR4265-201ENST00000582152 99 ntBASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 AP002761.4-201ENST00000565433 3361 ntBASIC13.96□□□□□ -0.17
SHROOM3Q8TF72 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 AC079250.1-201ENST00000456046 531 ntBASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 NAA38-204ENST00000575208 529 ntTSL 3 BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.96□□□□□ -0.18
SHROOM3Q8TF72 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 NUTM2HP-201ENST00000442076 2498 ntBASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 AL365181.1-201ENST00000564032 1828 ntBASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 AC002350.2-201ENST00000623894 1828 ntBASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 GDA-203ENST00000376986 1771 ntTSL 2 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 VENTXP3-201ENST00000546480 773 ntBASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 NUDT4P2-201ENST00000578341 546 ntBASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 AC006158.1-201ENST00000610661 249 ntBASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHROOM3Q8TF72 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 SAA2-206ENST00000530400 323 ntTSL 3 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 AC002044.2-201ENST00000624910 970 ntBASIC13.94□□□□□ -0.18
SHROOM3Q8TF72 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 486.1 ms