Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTC1Q2NKJ3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.7□□□□□ -0.06
CTC1Q2NKJ3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTC1Q2NKJ3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CTC1Q2NKJ3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CTC1Q2NKJ3 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 MYADML-201ENST00000474610 2147 ntBASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 AC111170.3-201ENST00000624282 2464 ntBASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 AC136604.1-202ENST00000425471 771 ntBASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 SEC63P1-201ENST00000425785 1258 ntBASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 AL512310.5-201ENST00000551999 515 ntBASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 AL591424.3-201ENST00000614278 872 ntBASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 FAM226B-201ENST00000602508 1490 ntBASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CTC1Q2NKJ3 BEND3P3-201ENST00000611030 2440 ntBASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 AC103592.1-201ENST00000394513 664 ntBASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 AHCYP3-201ENST00000420053 1279 ntBASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 ZNF877P-201ENST00000437614 612 ntBASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 RN7SL351P-201ENST00000469306 248 ntBASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 GPX3-202ENST00000517973 612 ntTSL 3 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 AL359219.1-201ENST00000556311 934 ntBASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 AC010531.8-201ENST00000623341 685 ntBASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTC1Q2NKJ3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms