Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 RN7SL147P-201ENST00000487345 298 ntBASIC18.51■□□□□ 0.55
CGNL1Q0VF96 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 AC113385.2-201ENST00000614465 762 ntBASIC18.51■□□□□ 0.55
CGNL1Q0VF96 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC18.51■□□□□ 0.55
CGNL1Q0VF96 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 PI4KAP2-201ENST00000360806 2080 ntBASIC18.51■□□□□ 0.55
CGNL1Q0VF96 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 STK25-235ENST00000543554 2556 ntTSL 2 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 AC005014.1-201ENST00000432006 2976 ntBASIC18.51■□□□□ 0.55
CGNL1Q0VF96 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGNL1Q0VF96 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 SERF2-204ENST00000402131 586 ntTSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 SNORD23-201ENST00000408876 110 ntBASIC18.5■□□□□ 0.55
CGNL1Q0VF96 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 GDNF-207ENST00000515058 764 ntTSL 5 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 AC135782.3-201ENST00000562782 2105 ntBASIC18.5■□□□□ 0.55
CGNL1Q0VF96 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 PXK-210ENST00000479241 2817 ntTSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 ABR-205ENST00000544583 5595 ntTSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGNL1Q0VF96 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 AC104961.1-201ENST00000427605 771 ntBASIC18.49■□□□□ 0.55
CGNL1Q0VF96 HLA-DPA2-205ENST00000433582 733 ntBASIC18.49■□□□□ 0.55
CGNL1Q0VF96 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 CISD2-202ENST00000503643 808 ntTSL 2 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 AC092862.1-201ENST00000541534 533 ntBASIC18.49■□□□□ 0.55
CGNL1Q0VF96 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 AGAP12P-201ENST00000585227 2359 ntBASIC18.49■□□□□ 0.55
CGNL1Q0VF96 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CGNL1Q0VF96 LSS-211ENST00000522411 2523 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms