Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC11.16□□□□□ -0.62
LMO4P61968 AC079414.2-201ENST00000567157 1104 ntBASIC11.16□□□□□ -0.62
LMO4P61968 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC11.16□□□□□ -0.62
LMO4P61968 EIF5AP2-201ENST00000585668 1047 ntBASIC11.16□□□□□ -0.62
LMO4P61968 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 SNORA50D-202ENST00000627561 132 ntBASIC11.16□□□□□ -0.62
LMO4P61968 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
LMO4P61968 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC11.16□□□□□ -0.62
LMO4P61968 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LMO4P61968 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 AC012358.2-201ENST00000430010 1434 ntBASIC11.16□□□□□ -0.62
LMO4P61968 AC011477.7-201ENST00000617163 1440 ntBASIC11.16□□□□□ -0.62
LMO4P61968 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.16□□□□□ -0.62
LMO4P61968 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.16□□□□□ -0.62
LMO4P61968 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.16□□□□□ -0.62
LMO4P61968 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.16□□□□□ -0.62
LMO4P61968 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LMO4P61968 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LMO4P61968 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.15□□□□□ -0.62
LMO4P61968 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.15□□□□□ -0.62
LMO4P61968 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC11.15□□□□□ -0.62
LMO4P61968 AL031587.5-201ENST00000624344 1849 ntBASIC11.15□□□□□ -0.62
LMO4P61968 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC11.15□□□□□ -0.62
LMO4P61968 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC11.15□□□□□ -0.62
LMO4P61968 KRT18P33-201ENST00000398525 1043 ntBASIC11.15□□□□□ -0.62
LMO4P61968 ACTBP7-201ENST00000418351 1124 ntBASIC11.15□□□□□ -0.62
LMO4P61968 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 AL137244.1-201ENST00000422931 865 ntBASIC11.15□□□□□ -0.62
LMO4P61968 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC11.15□□□□□ -0.62
LMO4P61968 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC11.15□□□□□ -0.62
LMO4P61968 KRT19P4-201ENST00000443208 943 ntBASIC11.15□□□□□ -0.62
LMO4P61968 RNU1-80P-201ENST00000459500 161 ntBASIC11.15□□□□□ -0.62
LMO4P61968 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC11.15□□□□□ -0.62
LMO4P61968 RPS18P9-201ENST00000482817 460 ntBASIC11.15□□□□□ -0.62
LMO4P61968 IGHVII-74-1-201ENST00000517572 241 ntBASIC11.15□□□□□ -0.62
LMO4P61968 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC11.15□□□□□ -0.62
LMO4P61968 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.15□□□□□ -0.62
LMO4P61968 AC091304.3-201ENST00000566500 716 ntBASIC11.15□□□□□ -0.62
LMO4P61968 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC11.15□□□□□ -0.62
LMO4P61968 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC11.15□□□□□ -0.62
LMO4P61968 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC11.15□□□□□ -0.62
LMO4P61968 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC11.15□□□□□ -0.62
LMO4P61968 AP003392.6-201ENST00000607709 325 ntBASIC11.15□□□□□ -0.62
LMO4P61968 AC123912.6-201ENST00000612657 315 ntBASIC11.15□□□□□ -0.62
LMO4P61968 AC018695.6-201ENST00000614011 534 ntBASIC11.15□□□□□ -0.62
LMO4P61968 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC11.15□□□□□ -0.62
LMO4P61968 MME-218ENST00000625667 363 ntTSL 5 BASIC11.15□□□□□ -0.62
LMO4P61968 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC11.15□□□□□ -0.62
LMO4P61968 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.15□□□□□ -0.62
LMO4P61968 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LMO4P61968 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC11.15□□□□□ -0.62
LMO4P61968 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.15□□□□□ -0.62
LMO4P61968 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
LMO4P61968 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LMO4P61968 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LMO4P61968 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LMO4P61968 BEND3P1-201ENST00000421591 1944 ntBASIC11.15□□□□□ -0.62
LMO4P61968 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LMO4P61968 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LMO4P61968 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LMO4P61968 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.15□□□□□ -0.63
LMO4P61968 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LMO4P61968 PI4KAP2-201ENST00000360806 2080 ntBASIC11.15□□□□□ -0.63
LMO4P61968 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LMO4P61968 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LMO4P61968 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.15□□□□□ -0.63
LMO4P61968 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LMO4P61968 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LMO4P61968 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms