Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S1P61966 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S1P61966 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP1S1P61966 SNU13-204ENST00000402458 462 ntTSL 3 BASIC13.81□□□□□ -0.2
AP1S1P61966 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.81□□□□□ -0.2
AP1S1P61966 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.81□□□□□ -0.2
AP1S1P61966 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.81□□□□□ -0.2
AP1S1P61966 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.81□□□□□ -0.2
AP1S1P61966 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.81□□□□□ -0.2
AP1S1P61966 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S1P61966 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.81□□□□□ -0.2
AP1S1P61966 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.81□□□□□ -0.2
AP1S1P61966 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S1P61966 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.81□□□□□ -0.2
AP1S1P61966 CES1P2-201ENST00000566467 1242 ntBASIC13.81□□□□□ -0.2
AP1S1P61966 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP1S1P61966 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S1P61966 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S1P61966 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 KRT8P42-201ENST00000405771 1399 ntBASIC13.81□□□□□ -0.2
AP1S1P61966 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
AP1S1P61966 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S1P61966 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S1P61966 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
AP1S1P61966 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
AP1S1P61966 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S1P61966 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S1P61966 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
AP1S1P61966 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S1P61966 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
AP1S1P61966 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
AP1S1P61966 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S1P61966 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S1P61966 AC104784.1-201ENST00000473096 294 ntBASIC13.8□□□□□ -0.2
AP1S1P61966 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 AL118522.1-201ENST00000611368 560 ntBASIC13.8□□□□□ -0.2
AP1S1P61966 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.8□□□□□ -0.2
AP1S1P61966 AC026120.2-201ENST00000617239 309 ntBASIC13.8□□□□□ -0.2
AP1S1P61966 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.8□□□□□ -0.2
AP1S1P61966 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 AL445250.1-201ENST00000641671 2259 ntBASIC13.8□□□□□ -0.2
AP1S1P61966 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S1P61966 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 FUCA1P1-201ENST00000374476 1351 ntBASIC13.8□□□□□ -0.2
AP1S1P61966 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
AP1S1P61966 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S1P61966 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms