Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.23□□□□□ -0.45
CTLA4P16410 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.23□□□□□ -0.45
CTLA4P16410 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.23□□□□□ -0.45
CTLA4P16410 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
CTLA4P16410 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.23□□□□□ -0.45
CTLA4P16410 AC006335.1-201ENST00000445200 547 ntBASIC12.23□□□□□ -0.45
CTLA4P16410 DUTP3-201ENST00000450025 415 ntBASIC12.23□□□□□ -0.45
CTLA4P16410 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.23□□□□□ -0.45
CTLA4P16410 AL353637.1-201ENST00000451571 732 ntBASIC12.23□□□□□ -0.45
CTLA4P16410 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.23□□□□□ -0.45
CTLA4P16410 RN7SL258P-201ENST00000478664 300 ntBASIC12.23□□□□□ -0.45
CTLA4P16410 RPL18AP8-201ENST00000486071 528 ntBASIC12.23□□□□□ -0.45
CTLA4P16410 AC024681.1-201ENST00000521917 487 ntBASIC12.23□□□□□ -0.45
CTLA4P16410 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.23□□□□□ -0.45
CTLA4P16410 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.23□□□□□ -0.45
CTLA4P16410 AL161670.2-201ENST00000557650 1227 ntBASIC12.23□□□□□ -0.45
CTLA4P16410 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.23□□□□□ -0.45
CTLA4P16410 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 AC026803.1-201ENST00000569130 274 ntBASIC12.23□□□□□ -0.45
CTLA4P16410 MIR4754-201ENST00000582477 89 ntBASIC12.23□□□□□ -0.45
CTLA4P16410 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
CTLA4P16410 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.23□□□□□ -0.45
CTLA4P16410 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.23□□□□□ -0.45
CTLA4P16410 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CTLA4P16410 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.22□□□□□ -0.45
CTLA4P16410 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
CTLA4P16410 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CTLA4P16410 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 Z98257.2-202ENST00000641138 1548 ntBASIC12.22□□□□□ -0.45
CTLA4P16410 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.22□□□□□ -0.45
CTLA4P16410 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.22□□□□□ -0.45
CTLA4P16410 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CTLA4P16410 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CTLA4P16410 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
CTLA4P16410 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 MIR769-201ENST00000390225 118 ntBASIC12.22□□□□□ -0.45
CTLA4P16410 MIR1307-201ENST00000408840 149 ntBASIC12.22□□□□□ -0.45
CTLA4P16410 RPL3P2-204ENST00000413027 1203 ntBASIC12.22□□□□□ -0.45
CTLA4P16410 AC099548.2-209ENST00000480264 625 ntBASIC12.22□□□□□ -0.45
CTLA4P16410 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.22□□□□□ -0.45
CTLA4P16410 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CTLA4P16410 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.22□□□□□ -0.45
CTLA4P16410 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.22□□□□□ -0.45
CTLA4P16410 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.22□□□□□ -0.45
CTLA4P16410 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.22□□□□□ -0.45
CTLA4P16410 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
CTLA4P16410 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.22□□□□□ -0.45
CTLA4P16410 AC009145.4-201ENST00000625119 1294 ntBASIC12.22□□□□□ -0.45
CTLA4P16410 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.22□□□□□ -0.45
CTLA4P16410 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
CTLA4P16410 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.22□□□□□ -0.45
CTLA4P16410 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CTLA4P16410 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CTLA4P16410 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.22□□□□□ -0.45
CTLA4P16410 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.22□□□□□ -0.45
CTLA4P16410 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.22□□□□□ -0.45
CTLA4P16410 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms