Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RB1P06400 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.38□□□□□ -0.11
RB1P06400 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 AC034205.3-201ENST00000603595 1376 ntBASIC14.38□□□□□ -0.11
RB1P06400 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RB1P06400 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 IQCF4-203ENST00000428561 420 ntBASIC14.38□□□□□ -0.11
RB1P06400 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 OR4C14P-201ENST00000440929 923 ntBASIC14.38□□□□□ -0.11
RB1P06400 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RB1P06400 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC14.38□□□□□ -0.11
RB1P06400 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.38□□□□□ -0.11
RB1P06400 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 MST1L-204ENST00000545160 559 ntTSL 4 BASIC14.38□□□□□ -0.11
RB1P06400 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC14.38□□□□□ -0.11
RB1P06400 AC092535.4-201ENST00000609548 397 ntBASIC14.38□□□□□ -0.11
RB1P06400 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.38□□□□□ -0.11
RB1P06400 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
RB1P06400 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RB1P06400 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RB1P06400 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RB1P06400 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 AC140479.7-201ENST00000636301 2332 ntBASIC14.37□□□□□ -0.11
RB1P06400 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
RB1P06400 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
RB1P06400 DLX4-206ENST00000611342 1662 ntBASIC14.37□□□□□ -0.11
RB1P06400 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RB1P06400 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RB1P06400 MARCKSL1P2-201ENST00000401037 976 ntBASIC14.37□□□□□ -0.11
RB1P06400 CACYBPP3-201ENST00000406011 625 ntBASIC14.37□□□□□ -0.11
RB1P06400 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 CRIP1P2-201ENST00000425396 228 ntBASIC14.37□□□□□ -0.11
RB1P06400 AL954722.1-201ENST00000431238 259 ntBASIC14.37□□□□□ -0.11
RB1P06400 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC14.37□□□□□ -0.11
RB1P06400 IGKV1OR-2-201ENST00000457995 350 ntBASIC14.37□□□□□ -0.11
RB1P06400 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC14.37□□□□□ -0.11
RB1P06400 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
RB1P06400 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC14.37□□□□□ -0.11
RB1P06400 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC14.37□□□□□ -0.11
RB1P06400 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC14.37□□□□□ -0.11
RB1P06400 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RB1P06400 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RB1P06400 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.37□□□□□ -0.11
RB1P06400 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RB1P06400 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RB1P06400 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RB1P06400 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.37□□□□□ -0.11
RB1P06400 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RB1P06400 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms