Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.35□□□□□ -0.43
CNOT4O95628 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
CNOT4O95628 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.35□□□□□ -0.43
CNOT4O95628 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.35□□□□□ -0.43
CNOT4O95628 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.35□□□□□ -0.43
CNOT4O95628 NUDT4P2-201ENST00000578341 546 ntBASIC12.35□□□□□ -0.43
CNOT4O95628 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 AL359091.4-201ENST00000610052 409 ntBASIC12.35□□□□□ -0.43
CNOT4O95628 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.35□□□□□ -0.43
CNOT4O95628 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.35□□□□□ -0.43
CNOT4O95628 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.35□□□□□ -0.43
CNOT4O95628 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.35□□□□□ -0.43
CNOT4O95628 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.35□□□□□ -0.43
CNOT4O95628 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.34□□□□□ -0.43
CNOT4O95628 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CNOT4O95628 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.34□□□□□ -0.43
CNOT4O95628 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CNOT4O95628 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 Z69890.1-201ENST00000382990 339 ntBASIC12.34□□□□□ -0.43
CNOT4O95628 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CNOT4O95628 AL157792.1-201ENST00000488281 530 ntBASIC12.34□□□□□ -0.43
CNOT4O95628 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 IGHV3-37-201ENST00000518544 340 ntBASIC12.34□□□□□ -0.43
CNOT4O95628 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.34□□□□□ -0.43
CNOT4O95628 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 HERC2P11-201ENST00000562845 725 ntBASIC12.34□□□□□ -0.43
CNOT4O95628 AC100756.2-201ENST00000569537 736 ntBASIC12.34□□□□□ -0.43
CNOT4O95628 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.34□□□□□ -0.43
CNOT4O95628 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.34□□□□□ -0.43
CNOT4O95628 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.34□□□□□ -0.43
CNOT4O95628 AC140113.1-201ENST00000603467 169 ntBASIC12.34□□□□□ -0.43
CNOT4O95628 AC007250.1-201ENST00000608934 338 ntBASIC12.34□□□□□ -0.43
CNOT4O95628 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.34□□□□□ -0.43
CNOT4O95628 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.34□□□□□ -0.43
CNOT4O95628 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CNOT4O95628 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CNOT4O95628 AC138761.6-201ENST00000583997 1423 ntBASIC12.34□□□□□ -0.43
CNOT4O95628 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.34□□□□□ -0.43
CNOT4O95628 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.34□□□□□ -0.43
CNOT4O95628 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CNOT4O95628 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.34□□□□□ -0.43
CNOT4O95628 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.34□□□□□ -0.43
CNOT4O95628 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNOT4O95628 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.33□□□□□ -0.43
CNOT4O95628 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CNOT4O95628 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CNOT4O95628 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
CNOT4O95628 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CNOT4O95628 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.33□□□□□ -0.44
CNOT4O95628 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms