Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLCA3PQ9Y6N3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CLCA3PQ9Y6N3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCA3PQ9Y6N3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLCA3PQ9Y6N3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLCA3PQ9Y6N3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLCA3PQ9Y6N3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCA3PQ9Y6N3 CLDN5-201ENST00000403084 2357 ntBASIC20.99■□□□□ 0.95
CLCA3PQ9Y6N3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCA3PQ9Y6N3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCA3PQ9Y6N3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCA3PQ9Y6N3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCA3PQ9Y6N3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCA3PQ9Y6N3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCA3PQ9Y6N3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CLCA3PQ9Y6N3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 DUX4L19-201ENST00000557448 1267 ntBASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 AC099791.2-201ENST00000605725 427 ntBASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLCA3PQ9Y6N3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCA3PQ9Y6N3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 AC144652.1-201ENST00000609974 1624 ntBASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 FP325331.1-202ENST00000623531 1380 ntBASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCA3PQ9Y6N3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLCA3PQ9Y6N3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 AC009086.3-201ENST00000623486 1008 ntBASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 SYT6-210ENST00000641643 1587 ntBASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCA3PQ9Y6N3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms