Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.31■■□□□ 1
AP4B1Q9Y6B7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.31■■□□□ 1
AP4B1Q9Y6B7 AC242852.2-201ENST00000615738 1807 ntBASIC21.31■■□□□ 1
AP4B1Q9Y6B7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.31■■□□□ 1
AP4B1Q9Y6B7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP4B1Q9Y6B7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.31■■□□□ 1
AP4B1Q9Y6B7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
AP4B1Q9Y6B7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
AP4B1Q9Y6B7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
AP4B1Q9Y6B7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.3■■□□□ 1
AP4B1Q9Y6B7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.3■■□□□ 1
AP4B1Q9Y6B7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.3■■□□□ 1
AP4B1Q9Y6B7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
AP4B1Q9Y6B7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
AP4B1Q9Y6B7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.3■■□□□ 1
AP4B1Q9Y6B7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.3■■□□□ 1
AP4B1Q9Y6B7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 AC103724.3-201ENST00000564481 992 ntBASIC21.29■■□□□ 1
AP4B1Q9Y6B7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.29■■□□□ 1
AP4B1Q9Y6B7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
AP4B1Q9Y6B7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.28■■□□□ 1
AP4B1Q9Y6B7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
AP4B1Q9Y6B7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
AP4B1Q9Y6B7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.28■■□□□ 1
AP4B1Q9Y6B7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
AP4B1Q9Y6B7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
AP4B1Q9Y6B7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.28■■□□□ 1
AP4B1Q9Y6B7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.28■■□□□ 1
AP4B1Q9Y6B7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.28■■□□□ 1
AP4B1Q9Y6B7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
AP4B1Q9Y6B7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.27■■□□□ 1
AP4B1Q9Y6B7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.27■■□□□ 1
AP4B1Q9Y6B7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
AP4B1Q9Y6B7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.27■■□□□ 1
AP4B1Q9Y6B7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
AP4B1Q9Y6B7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
AP4B1Q9Y6B7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
AP4B1Q9Y6B7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.27■■□□□ 1
AP4B1Q9Y6B7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.27■■□□□ 1
AP4B1Q9Y6B7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
AP4B1Q9Y6B7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 KRT18P24-201ENST00000344739 1156 ntBASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 AL031848.2-201ENST00000607670 837 ntBASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
AP4B1Q9Y6B7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4B1Q9Y6B7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4B1Q9Y6B7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
AP4B1Q9Y6B7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4B1Q9Y6B7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4B1Q9Y6B7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4B1Q9Y6B7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.25■□□□□ 0.99
AP4B1Q9Y6B7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4B1Q9Y6B7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.25■□□□□ 0.99
AP4B1Q9Y6B7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
AP4B1Q9Y6B7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4B1Q9Y6B7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.24■□□□□ 0.99
AP4B1Q9Y6B7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
AP4B1Q9Y6B7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.24■□□□□ 0.99
AP4B1Q9Y6B7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4B1Q9Y6B7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 AC011551.1-201ENST00000614101 683 ntBASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms