Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 C9orf163-202ENST00000624034 2573 ntBASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 RASA4CP-201ENST00000424092 1398 ntBASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 MIR5787-201ENST00000611784 55 ntBASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 AC241377.3-202ENST00000626088 1088 ntBASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 AC241585.3-202ENST00000628937 1088 ntBASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 AC245100.8-202ENST00000629247 1058 ntBASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA6Q9Y5G7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 C17orf82-201ENST00000623772 1530 ntBASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 AL161729.1-201ENST00000604104 1402 ntBASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 AC027682.1-201ENST00000562846 899 ntBASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA6Q9Y5G7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA6Q9Y5G7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGA6Q9Y5G7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA6Q9Y5G7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA6Q9Y5G7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA6Q9Y5G7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PCDHGA6Q9Y5G7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA6Q9Y5G7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA6Q9Y5G7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA6Q9Y5G7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA6Q9Y5G7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA6Q9Y5G7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.39■■□□□ 1.02
PCDHGA6Q9Y5G7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA6Q9Y5G7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA6Q9Y5G7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA6Q9Y5G7 CA15P2-201ENST00000611168 834 ntBASIC21.39■■□□□ 1.01
PCDHGA6Q9Y5G7 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.39■■□□□ 1.01
PCDHGA6Q9Y5G7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA6Q9Y5G7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA6Q9Y5G7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGA6Q9Y5G7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA6Q9Y5G7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PCDHGA6Q9Y5G7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGA6Q9Y5G7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHGA6Q9Y5G7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA6Q9Y5G7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA6Q9Y5G7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCDHGA6Q9Y5G7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 HLA-L-211ENST00000482052 1765 ntBASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 AC092666.2-201ENST00000613287 246 ntBASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 MIR6821-201ENST00000617625 74 ntBASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 AC136469.2-201ENST00000623944 1028 ntBASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGA6Q9Y5G7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms