Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PCDHB11Q9Y5F2 AC012676.1-201ENST00000574705 1949 ntBASIC21.83■■□□□ 1.09
PCDHB11Q9Y5F2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB11Q9Y5F2 AC133561.1-201ENST00000568600 2415 ntBASIC21.83■■□□□ 1.09
PCDHB11Q9Y5F2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB11Q9Y5F2 AF213884.3-201ENST00000563833 479 ntBASIC21.83■■□□□ 1.09
PCDHB11Q9Y5F2 AL136967.2-201ENST00000623968 743 ntBASIC21.83■■□□□ 1.09
PCDHB11Q9Y5F2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHB11Q9Y5F2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHB11Q9Y5F2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
PCDHB11Q9Y5F2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHB11Q9Y5F2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDHB11Q9Y5F2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB11Q9Y5F2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB11Q9Y5F2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHB11Q9Y5F2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB11Q9Y5F2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB11Q9Y5F2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB11Q9Y5F2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHB11Q9Y5F2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PCDHB11Q9Y5F2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB11Q9Y5F2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB11Q9Y5F2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 AC091305.1-201ENST00000479476 895 ntBASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB11Q9Y5F2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 AC068473.5-201ENST00000616428 2072 ntBASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHB11Q9Y5F2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 MIR939-201ENST00000401314 82 ntBASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHB11Q9Y5F2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 AC009102.2-201ENST00000606772 1639 ntBASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB11Q9Y5F2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB11Q9Y5F2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
PCDHB11Q9Y5F2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB11Q9Y5F2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDHB11Q9Y5F2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 AP001330.3-201ENST00000520123 633 ntBASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms