Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LRRC42Q9Y546 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRC42Q9Y546 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC42Q9Y546 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.07■□□□□ 0.96
LRRC42Q9Y546 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC42Q9Y546 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LRRC42Q9Y546 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.07■□□□□ 0.96
LRRC42Q9Y546 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC42Q9Y546 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.06■□□□□ 0.96
LRRC42Q9Y546 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC42Q9Y546 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC42Q9Y546 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LRRC42Q9Y546 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC42Q9Y546 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC42Q9Y546 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC42Q9Y546 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC42Q9Y546 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC42Q9Y546 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC42Q9Y546 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRRC42Q9Y546 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC42Q9Y546 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC42Q9Y546 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRC42Q9Y546 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC42Q9Y546 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LRRC42Q9Y546 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRC42Q9Y546 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC42Q9Y546 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRC42Q9Y546 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LRRC42Q9Y546 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.03■□□□□ 0.96
LRRC42Q9Y546 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LRRC42Q9Y546 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC42Q9Y546 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC42Q9Y546 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC42Q9Y546 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC42Q9Y546 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC42Q9Y546 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC42Q9Y546 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC42Q9Y546 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
LRRC42Q9Y546 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC42Q9Y546 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC42Q9Y546 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC42Q9Y546 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRC42Q9Y546 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC42Q9Y546 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC42Q9Y546 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC42Q9Y546 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LRRC42Q9Y546 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC42Q9Y546 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC42Q9Y546 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC42Q9Y546 AC087741.3-201ENST00000624270 1347 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms