Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.22■■□□□ 1.95
MKRN1Q9UHC7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
MKRN1Q9UHC7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC27.22■■□□□ 1.95
MKRN1Q9UHC7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
MKRN1Q9UHC7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
MKRN1Q9UHC7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
MKRN1Q9UHC7 CDCA4P2-201ENST00000441182 718 ntBASIC27.21■■□□□ 1.95
MKRN1Q9UHC7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.21■■□□□ 1.95
MKRN1Q9UHC7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.21■■□□□ 1.95
MKRN1Q9UHC7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
MKRN1Q9UHC7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
MKRN1Q9UHC7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
MKRN1Q9UHC7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
MKRN1Q9UHC7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
MKRN1Q9UHC7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.2■■□□□ 1.94
MKRN1Q9UHC7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC27.2■■□□□ 1.94
MKRN1Q9UHC7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
MKRN1Q9UHC7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
MKRN1Q9UHC7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
MKRN1Q9UHC7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.19■■□□□ 1.94
MKRN1Q9UHC7 TSPY20P-201ENST00000450910 630 ntBASIC27.19■■□□□ 1.94
MKRN1Q9UHC7 AC073111.5-205ENST00000641717 521 ntBASIC27.19■■□□□ 1.94
MKRN1Q9UHC7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
MKRN1Q9UHC7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC27.19■■□□□ 1.94
MKRN1Q9UHC7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 AC006455.2-201ENST00000429931 906 ntBASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 AC009102.2-201ENST00000606772 1639 ntBASIC27.18■■□□□ 1.94
MKRN1Q9UHC7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC27.17■■□□□ 1.94
MKRN1Q9UHC7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.17■■□□□ 1.94
MKRN1Q9UHC7 CD99P1-205ENST00000527459 561 ntBASIC27.17■■□□□ 1.94
MKRN1Q9UHC7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.17■■□□□ 1.94
MKRN1Q9UHC7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
MKRN1Q9UHC7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
MKRN1Q9UHC7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
MKRN1Q9UHC7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 AL109923.1-201ENST00000618799 583 ntBASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
MKRN1Q9UHC7 ALDH1A3-203ENST00000557963 1670 ntBASIC27.15■■□□□ 1.94
MKRN1Q9UHC7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.15■■□□□ 1.94
MKRN1Q9UHC7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
MKRN1Q9UHC7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
MKRN1Q9UHC7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
MKRN1Q9UHC7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
MKRN1Q9UHC7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
MKRN1Q9UHC7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
MKRN1Q9UHC7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.14■■□□□ 1.94
MKRN1Q9UHC7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.14■■□□□ 1.94
MKRN1Q9UHC7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
MKRN1Q9UHC7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
MKRN1Q9UHC7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
MKRN1Q9UHC7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.13■■□□□ 1.93
MKRN1Q9UHC7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
MKRN1Q9UHC7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.13■■□□□ 1.93
MKRN1Q9UHC7 AC012414.1-201ENST00000556676 535 ntBASIC27.13■■□□□ 1.93
MKRN1Q9UHC7 MIR3181-201ENST00000578512 73 ntBASIC27.13■■□□□ 1.93
MKRN1Q9UHC7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.13■■□□□ 1.93
MKRN1Q9UHC7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
MKRN1Q9UHC7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
MKRN1Q9UHC7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC27.13■■□□□ 1.93
MKRN1Q9UHC7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
MKRN1Q9UHC7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
MKRN1Q9UHC7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
MKRN1Q9UHC7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC27.12■■□□□ 1.93
MKRN1Q9UHC7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.12■■□□□ 1.93
MKRN1Q9UHC7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.12■■□□□ 1.93
MKRN1Q9UHC7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 AC026185.1-201ENST00000445748 174 ntBASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 TERF1P2-201ENST00000583350 1212 ntBASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms