Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PPP4R1LQ9P1A2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
PPP4R1LQ9P1A2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.39■□□□□ 0.85
PPP4R1LQ9P1A2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PPP4R1LQ9P1A2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PPP4R1LQ9P1A2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.39■□□□□ 0.85
PPP4R1LQ9P1A2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.39■□□□□ 0.85
PPP4R1LQ9P1A2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPP4R1LQ9P1A2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPP4R1LQ9P1A2 SYT6-210ENST00000641643 1587 ntBASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 AL353803.4-201ENST00000565882 1934 ntBASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 AC006455.2-201ENST00000429931 906 ntBASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 DUX4L4-201ENST00000566884 1269 ntBASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R1LQ9P1A2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R1LQ9P1A2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 AC096631.2-201ENST00000436136 790 ntBASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R1LQ9P1A2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PPP4R1LQ9P1A2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 UNC93B3-201ENST00000308076 687 ntBASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 pRNA.6-201ENST00000610482 90 ntBASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 pRNA.5-201ENST00000612139 90 ntBASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 pRNA.11-201ENST00000618423 90 ntBASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 pRNA.13-201ENST00000619112 90 ntBASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms