Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HPF1Q9NWY4 MIR3181-201ENST00000578512 73 ntBASIC20.61■□□□□ 0.89
HPF1Q9NWY4 pRNA.6-201ENST00000610482 90 ntBASIC20.61■□□□□ 0.89
HPF1Q9NWY4 pRNA.5-201ENST00000612139 90 ntBASIC20.61■□□□□ 0.89
HPF1Q9NWY4 pRNA.11-201ENST00000618423 90 ntBASIC20.61■□□□□ 0.89
HPF1Q9NWY4 pRNA.13-201ENST00000619112 90 ntBASIC20.61■□□□□ 0.89
HPF1Q9NWY4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HPF1Q9NWY4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HPF1Q9NWY4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.61■□□□□ 0.89
HPF1Q9NWY4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HPF1Q9NWY4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HPF1Q9NWY4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HPF1Q9NWY4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 AL031432.3-201ENST00000607698 485 ntBASIC20.59■□□□□ 0.89
HPF1Q9NWY4 AC136469.2-201ENST00000623944 1028 ntBASIC20.59■□□□□ 0.89
HPF1Q9NWY4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HPF1Q9NWY4 FP325331.1-202ENST00000623531 1380 ntBASIC20.59■□□□□ 0.89
HPF1Q9NWY4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HPF1Q9NWY4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HPF1Q9NWY4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HPF1Q9NWY4 AC144652.1-201ENST00000609974 1624 ntBASIC20.58■□□□□ 0.89
HPF1Q9NWY4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HPF1Q9NWY4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HPF1Q9NWY4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.58■□□□□ 0.89
HPF1Q9NWY4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.58■□□□□ 0.89
HPF1Q9NWY4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.58■□□□□ 0.89
HPF1Q9NWY4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.58■□□□□ 0.89
HPF1Q9NWY4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.58■□□□□ 0.89
HPF1Q9NWY4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
HPF1Q9NWY4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.58■□□□□ 0.88
HPF1Q9NWY4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPF1Q9NWY4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPF1Q9NWY4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
HPF1Q9NWY4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPF1Q9NWY4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HPF1Q9NWY4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPF1Q9NWY4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HPF1Q9NWY4 SUDS3P1-201ENST00000505831 966 ntBASIC20.57■□□□□ 0.88
HPF1Q9NWY4 AF213884.3-201ENST00000563833 479 ntBASIC20.57■□□□□ 0.88
HPF1Q9NWY4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HPF1Q9NWY4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HPF1Q9NWY4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
HPF1Q9NWY4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 AP001330.3-201ENST00000520123 633 ntBASIC20.56■□□□□ 0.88
HPF1Q9NWY4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.56■□□□□ 0.88
HPF1Q9NWY4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HPF1Q9NWY4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPF1Q9NWY4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPF1Q9NWY4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPF1Q9NWY4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPF1Q9NWY4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.55■□□□□ 0.88
HPF1Q9NWY4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.55■□□□□ 0.88
HPF1Q9NWY4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.55■□□□□ 0.88
HPF1Q9NWY4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPF1Q9NWY4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPF1Q9NWY4 LINC01529-204ENST00000636474 1715 ntBASIC20.55■□□□□ 0.88
HPF1Q9NWY4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPF1Q9NWY4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.54■□□□□ 0.88
HPF1Q9NWY4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPF1Q9NWY4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPF1Q9NWY4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms