Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 AL035685.1-201ENST00000636663 812 ntBASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 LINC00526-201ENST00000581067 1875 ntBASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 AC127496.7-201ENST00000625110 1798 ntBASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIN7CQ9NUP9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.46■□□□□ 0.55
LIN7CQ9NUP9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.46■□□□□ 0.55
LIN7CQ9NUP9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.46■□□□□ 0.55
LIN7CQ9NUP9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIN7CQ9NUP9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LIN7CQ9NUP9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIN7CQ9NUP9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIN7CQ9NUP9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LIN7CQ9NUP9 ECEL1P1-201ENST00000373592 1742 ntBASIC18.46■□□□□ 0.55
LIN7CQ9NUP9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 KRT125P-201ENST00000546827 989 ntBASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIN7CQ9NUP9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIN7CQ9NUP9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.44■□□□□ 0.54
LIN7CQ9NUP9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.44■□□□□ 0.54
LIN7CQ9NUP9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIN7CQ9NUP9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.44■□□□□ 0.54
LIN7CQ9NUP9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LIN7CQ9NUP9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.44■□□□□ 0.54
LIN7CQ9NUP9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 LINC00565-201ENST00000562710 2331 ntBASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 ESRRAP2-201ENST00000418437 1549 ntBASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LIN7CQ9NUP9 AF131216.4-201ENST00000638924 1588 ntBASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 AC021242.3-201ENST00000607598 1377 ntBASIC18.42■□□□□ 0.54
LIN7CQ9NUP9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LIN7CQ9NUP9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms