Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 DUX4L4-201ENST00000566884 1269 ntBASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 AL031432.3-201ENST00000607698 485 ntBASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MKKSQ9NPJ1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.08■□□□□ 0.97
MKKSQ9NPJ1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MKKSQ9NPJ1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.08■□□□□ 0.97
MKKSQ9NPJ1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
MKKSQ9NPJ1 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.08■□□□□ 0.97
MKKSQ9NPJ1 LINC01529-204ENST00000636474 1715 ntBASIC21.08■□□□□ 0.97
MKKSQ9NPJ1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.08■□□□□ 0.97
MKKSQ9NPJ1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MKKSQ9NPJ1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.07■□□□□ 0.96
MKKSQ9NPJ1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MKKSQ9NPJ1 SUDS3P1-201ENST00000505831 966 ntBASIC21.07■□□□□ 0.96
MKKSQ9NPJ1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.07■□□□□ 0.96
MKKSQ9NPJ1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MKKSQ9NPJ1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
MKKSQ9NPJ1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MKKSQ9NPJ1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
MKKSQ9NPJ1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.05■□□□□ 0.96
MKKSQ9NPJ1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 AL499627.2-201ENST00000606283 725 ntBASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MKKSQ9NPJ1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MKKSQ9NPJ1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.03■□□□□ 0.96
MKKSQ9NPJ1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MKKSQ9NPJ1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MKKSQ9NPJ1 MIR939-201ENST00000401314 82 ntBASIC21.03■□□□□ 0.96
MKKSQ9NPJ1 AP001330.3-201ENST00000520123 633 ntBASIC21.03■□□□□ 0.96
MKKSQ9NPJ1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.03■□□□□ 0.96
MKKSQ9NPJ1 AF213884.3-201ENST00000563833 479 ntBASIC21.03■□□□□ 0.96
MKKSQ9NPJ1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MKKSQ9NPJ1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 AL136967.2-201ENST00000623968 743 ntBASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MKKSQ9NPJ1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MKKSQ9NPJ1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MKKSQ9NPJ1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms