Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.02■□□□□ 0.95
NEUROD4Q9HD90 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 AC079834.2-201ENST00000609776 1949 ntBASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NEUROD4Q9HD90 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEUROD4Q9HD90 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEUROD4Q9HD90 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEUROD4Q9HD90 MTDHP2-201ENST00000601468 714 ntBASIC21■□□□□ 0.95
NEUROD4Q9HD90 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEUROD4Q9HD90 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEUROD4Q9HD90 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEUROD4Q9HD90 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NEUROD4Q9HD90 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NEUROD4Q9HD90 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NEUROD4Q9HD90 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEUROD4Q9HD90 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21■□□□□ 0.95
NEUROD4Q9HD90 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21■□□□□ 0.95
NEUROD4Q9HD90 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.99■□□□□ 0.95
NEUROD4Q9HD90 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 MIR4787-201ENST00000607364 84 ntBASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.98■□□□□ 0.95
NEUROD4Q9HD90 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NEUROD4Q9HD90 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEUROD4Q9HD90 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEUROD4Q9HD90 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEUROD4Q9HD90 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NEUROD4Q9HD90 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
NEUROD4Q9HD90 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEUROD4Q9HD90 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEUROD4Q9HD90 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 LINC01529-204ENST00000636474 1715 ntBASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 ESRRAP2-201ENST00000418437 1549 ntBASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 FP325331.1-202ENST00000623531 1380 ntBASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.96■□□□□ 0.95
NEUROD4Q9HD90 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEUROD4Q9HD90 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.95■□□□□ 0.94
NEUROD4Q9HD90 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEUROD4Q9HD90 AL356441.2-201ENST00000443009 864 ntBASIC20.95■□□□□ 0.94
NEUROD4Q9HD90 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.95■□□□□ 0.94
NEUROD4Q9HD90 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEUROD4Q9HD90 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms