Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CD248Q9HCU0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CD248Q9HCU0 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.24■■□□□ 1.31
CD248Q9HCU0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CD248Q9HCU0 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.24■■□□□ 1.31
CD248Q9HCU0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CD248Q9HCU0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CD248Q9HCU0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CD248Q9HCU0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CD248Q9HCU0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.23■■□□□ 1.31
CD248Q9HCU0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CD248Q9HCU0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CD248Q9HCU0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CD248Q9HCU0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CD248Q9HCU0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CD248Q9HCU0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CD248Q9HCU0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CD248Q9HCU0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CD248Q9HCU0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CD248Q9HCU0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.22■■□□□ 1.31
CD248Q9HCU0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CD248Q9HCU0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CD248Q9HCU0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.22■■□□□ 1.31
CD248Q9HCU0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CD248Q9HCU0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.22■■□□□ 1.31
CD248Q9HCU0 AL355001.2-201ENST00000620617 1191 ntBASIC23.22■■□□□ 1.31
CD248Q9HCU0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.22■■□□□ 1.31
CD248Q9HCU0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CD248Q9HCU0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CD248Q9HCU0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.21■■□□□ 1.31
CD248Q9HCU0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CD248Q9HCU0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CD248Q9HCU0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.21■■□□□ 1.31
CD248Q9HCU0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CD248Q9HCU0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.21■■□□□ 1.31
CD248Q9HCU0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.21■■□□□ 1.31
CD248Q9HCU0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CD248Q9HCU0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CD248Q9HCU0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.21■■□□□ 1.31
CD248Q9HCU0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CD248Q9HCU0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CD248Q9HCU0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CD248Q9HCU0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CD248Q9HCU0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CD248Q9HCU0 C1orf229-201ENST00000623686 2258 ntBASIC23.2■■□□□ 1.3
CD248Q9HCU0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CD248Q9HCU0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CD248Q9HCU0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CD248Q9HCU0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CD248Q9HCU0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CD248Q9HCU0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CD248Q9HCU0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.2■■□□□ 1.3
CD248Q9HCU0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CD248Q9HCU0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CD248Q9HCU0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
CD248Q9HCU0 AL136967.2-201ENST00000623968 743 ntBASIC23.2■■□□□ 1.3
CD248Q9HCU0 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.2■■□□□ 1.3
CD248Q9HCU0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CD248Q9HCU0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.19■■□□□ 1.3
CD248Q9HCU0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CD248Q9HCU0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CD248Q9HCU0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.19■■□□□ 1.3
CD248Q9HCU0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.19■■□□□ 1.3
CD248Q9HCU0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CD248Q9HCU0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CD248Q9HCU0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CD248Q9HCU0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.19■■□□□ 1.3
CD248Q9HCU0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CD248Q9HCU0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.19■■□□□ 1.3
CD248Q9HCU0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD248Q9HCU0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CD248Q9HCU0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CD248Q9HCU0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CD248Q9HCU0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.18■■□□□ 1.3
CD248Q9HCU0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.18■■□□□ 1.3
CD248Q9HCU0 AC026271.2-201ENST00000428091 497 ntBASIC23.18■■□□□ 1.3
CD248Q9HCU0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.18■■□□□ 1.3
CD248Q9HCU0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD248Q9HCU0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.18■■□□□ 1.3
CD248Q9HCU0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD248Q9HCU0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CD248Q9HCU0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.18■■□□□ 1.3
CD248Q9HCU0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CD248Q9HCU0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CD248Q9HCU0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD248Q9HCU0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD248Q9HCU0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.17■■□□□ 1.3
CD248Q9HCU0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD248Q9HCU0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD248Q9HCU0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD248Q9HCU0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.17■■□□□ 1.3
CD248Q9HCU0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.17■■□□□ 1.3
CD248Q9HCU0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.17■■□□□ 1.3
CD248Q9HCU0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CD248Q9HCU0 RARRES2P6-201ENST00000567333 442 ntBASIC23.17■■□□□ 1.3
CD248Q9HCU0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.17■■□□□ 1.3
CD248Q9HCU0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.17■■□□□ 1.3
CD248Q9HCU0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.17■■□□□ 1.3
CD248Q9HCU0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.17■■□□□ 1.3
CD248Q9HCU0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms