Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SH2D4AQ9H788 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SH2D4AQ9H788 OR2I1P-207ENST00000453522 948 ntBASIC26.1■■□□□ 1.77
SH2D4AQ9H788 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.1■■□□□ 1.77
SH2D4AQ9H788 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
SH2D4AQ9H788 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
SH2D4AQ9H788 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.1■■□□□ 1.77
SH2D4AQ9H788 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SH2D4AQ9H788 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.1■■□□□ 1.77
SH2D4AQ9H788 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 AC104564.3-201ENST00000582367 638 ntBASIC26.09■■□□□ 1.77
SH2D4AQ9H788 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SH2D4AQ9H788 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
SH2D4AQ9H788 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
SH2D4AQ9H788 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SH2D4AQ9H788 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.08■■□□□ 1.77
SH2D4AQ9H788 IGHV3-19-201ENST00000521488 291 ntBASIC26.08■■□□□ 1.77
SH2D4AQ9H788 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.08■■□□□ 1.77
SH2D4AQ9H788 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
SH2D4AQ9H788 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SH2D4AQ9H788 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
SH2D4AQ9H788 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SH2D4AQ9H788 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.08■■□□□ 1.76
SH2D4AQ9H788 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SH2D4AQ9H788 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.07■■□□□ 1.76
SH2D4AQ9H788 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
SH2D4AQ9H788 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.07■■□□□ 1.76
SH2D4AQ9H788 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SH2D4AQ9H788 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
SH2D4AQ9H788 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SH2D4AQ9H788 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
SH2D4AQ9H788 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SH2D4AQ9H788 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.06■■□□□ 1.76
SH2D4AQ9H788 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SH2D4AQ9H788 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SH2D4AQ9H788 AC087623.3-201ENST00000607047 1098 ntBASIC26.06■■□□□ 1.76
SH2D4AQ9H788 AC092666.2-201ENST00000613287 246 ntBASIC26.06■■□□□ 1.76
SH2D4AQ9H788 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SH2D4AQ9H788 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SH2D4AQ9H788 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.06■■□□□ 1.76
SH2D4AQ9H788 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SH2D4AQ9H788 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH2D4AQ9H788 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.05■■□□□ 1.76
SH2D4AQ9H788 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SH2D4AQ9H788 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.05■■□□□ 1.76
SH2D4AQ9H788 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH2D4AQ9H788 LINC01124-201ENST00000409786 2117 ntBASIC26.05■■□□□ 1.76
SH2D4AQ9H788 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.05■■□□□ 1.76
SH2D4AQ9H788 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH2D4AQ9H788 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SH2D4AQ9H788 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
SH2D4AQ9H788 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.02■■□□□ 1.76
SH2D4AQ9H788 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
SH2D4AQ9H788 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.02■■□□□ 1.76
SH2D4AQ9H788 AL358852.1-201ENST00000623174 1268 ntBASIC26.02■■□□□ 1.76
SH2D4AQ9H788 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.02■■□□□ 1.76
SH2D4AQ9H788 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SH2D4AQ9H788 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SH2D4AQ9H788 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SH2D4AQ9H788 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SH2D4AQ9H788 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SH2D4AQ9H788 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SH2D4AQ9H788 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SH2D4AQ9H788 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SH2D4AQ9H788 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.01■■□□□ 1.75
SH2D4AQ9H788 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SH2D4AQ9H788 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.01■■□□□ 1.75
SH2D4AQ9H788 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms