Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRDM13Q9H4Q3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM13Q9H4Q3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM13Q9H4Q3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 AC009102.2-201ENST00000606772 1639 ntBASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRDM13Q9H4Q3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 MIR939-201ENST00000401314 82 ntBASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRDM13Q9H4Q3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 AC011298.3-201ENST00000615796 283 ntBASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 AC241377.3-202ENST00000626088 1088 ntBASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 AC241585.3-202ENST00000628937 1088 ntBASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 AC245100.8-202ENST00000629247 1058 ntBASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.34■□□□□ 0.53
PRDM13Q9H4Q3 C17orf82-201ENST00000623772 1530 ntBASIC18.33■□□□□ 0.53
PRDM13Q9H4Q3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRDM13Q9H4Q3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.33■□□□□ 0.53
PRDM13Q9H4Q3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.33■□□□□ 0.53
PRDM13Q9H4Q3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRDM13Q9H4Q3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRDM13Q9H4Q3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PRDM13Q9H4Q3 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.33■□□□□ 0.52
PRDM13Q9H4Q3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRDM13Q9H4Q3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRDM13Q9H4Q3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.33■□□□□ 0.52
PRDM13Q9H4Q3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRDM13Q9H4Q3 C1orf229-201ENST00000623686 2258 ntBASIC18.33■□□□□ 0.52
PRDM13Q9H4Q3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 SERBP1P1-201ENST00000396021 1160 ntBASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRDM13Q9H4Q3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 AC091305.1-201ENST00000479476 895 ntBASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 AP001330.3-201ENST00000520123 633 ntBASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 AC099791.2-201ENST00000605725 427 ntBASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRDM13Q9H4Q3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRDM13Q9H4Q3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.3■□□□□ 0.52
PRDM13Q9H4Q3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PRDM13Q9H4Q3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRDM13Q9H4Q3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PRDM13Q9H4Q3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRDM13Q9H4Q3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms