Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATXN3LQ9H3M9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATXN3LQ9H3M9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
ATXN3LQ9H3M9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.44■■□□□ 1.34
ATXN3LQ9H3M9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATXN3LQ9H3M9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ATXN3LQ9H3M9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.43■■□□□ 1.34
ATXN3LQ9H3M9 SLC47A1P1-202ENST00000449666 945 ntBASIC23.43■■□□□ 1.34
ATXN3LQ9H3M9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.43■■□□□ 1.34
ATXN3LQ9H3M9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.43■■□□□ 1.34
ATXN3LQ9H3M9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ATXN3LQ9H3M9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 AC004812.2-201ENST00000611079 2094 ntBASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 AC133637.1-201ENST00000624115 1537 ntBASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.42■■□□□ 1.34
ATXN3LQ9H3M9 TSPY26P-201ENST00000476365 1326 ntBASIC23.41■■□□□ 1.34
ATXN3LQ9H3M9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ATXN3LQ9H3M9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
ATXN3LQ9H3M9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ATXN3LQ9H3M9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ATXN3LQ9H3M9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ATXN3LQ9H3M9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.4■■□□□ 1.34
ATXN3LQ9H3M9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
ATXN3LQ9H3M9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ATXN3LQ9H3M9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ATXN3LQ9H3M9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ATXN3LQ9H3M9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.39■■□□□ 1.33
ATXN3LQ9H3M9 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.39■■□□□ 1.33
ATXN3LQ9H3M9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
ATXN3LQ9H3M9 FP325331.1-202ENST00000623531 1380 ntBASIC23.39■■□□□ 1.33
ATXN3LQ9H3M9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 AL499627.2-201ENST00000606283 725 ntBASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATXN3LQ9H3M9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 AL162430.1-201ENST00000480705 870 ntBASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATXN3LQ9H3M9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 DUX4L4-201ENST00000566884 1269 ntBASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.36■■□□□ 1.33
ATXN3LQ9H3M9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 ABCB10P4-201ENST00000566803 2184 ntBASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 338.4 ms