Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM2Q9C040 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM2Q9C040 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TRIM2Q9C040 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM2Q9C040 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM2Q9C040 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM2Q9C040 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM2Q9C040 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM2Q9C040 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM2Q9C040 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM2Q9C040 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM2Q9C040 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM2Q9C040 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM2Q9C040 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM2Q9C040 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM2Q9C040 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM2Q9C040 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM2Q9C040 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TRIM2Q9C040 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRIM2Q9C040 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRIM2Q9C040 AL353803.4-201ENST00000565882 1934 ntBASIC20.46■□□□□ 0.87
TRIM2Q9C040 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM2Q9C040 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.46■□□□□ 0.87
TRIM2Q9C040 AC144652.1-201ENST00000609974 1624 ntBASIC20.45■□□□□ 0.87
TRIM2Q9C040 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM2Q9C040 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM2Q9C040 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM2Q9C040 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM2Q9C040 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM2Q9C040 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM2Q9C040 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM2Q9C040 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM2Q9C040 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
TRIM2Q9C040 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM2Q9C040 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM2Q9C040 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
TRIM2Q9C040 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM2Q9C040 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TRIM2Q9C040 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM2Q9C040 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM2Q9C040 MIR4787-201ENST00000607364 84 ntBASIC20.44■□□□□ 0.86
TRIM2Q9C040 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM2Q9C040 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM2Q9C040 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM2Q9C040 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM2Q9C040 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM2Q9C040 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM2Q9C040 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM2Q9C040 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM2Q9C040 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM2Q9C040 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM2Q9C040 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM2Q9C040 C1orf229-201ENST00000623686 2258 ntBASIC20.43■□□□□ 0.86
TRIM2Q9C040 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM2Q9C040 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM2Q9C040 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRIM2Q9C040 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM2Q9C040 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM2Q9C040 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRIM2Q9C040 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TRIM2Q9C040 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM2Q9C040 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM2Q9C040 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRIM2Q9C040 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM2Q9C040 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TRIM2Q9C040 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM2Q9C040 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM2Q9C040 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM2Q9C040 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM2Q9C040 MTDHP2-201ENST00000601468 714 ntBASIC20.42■□□□□ 0.86
TRIM2Q9C040 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM2Q9C040 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM2Q9C040 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRIM2Q9C040 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM2Q9C040 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM2Q9C040 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM2Q9C040 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM2Q9C040 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM2Q9C040 AC233723.2-201ENST00000623798 2106 ntBASIC20.41■□□□□ 0.86
TRIM2Q9C040 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM2Q9C040 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM2Q9C040 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM2Q9C040 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM2Q9C040 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM2Q9C040 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM2Q9C040 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRIM2Q9C040 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM2Q9C040 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM2Q9C040 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM2Q9C040 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM2Q9C040 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM2Q9C040 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM2Q9C040 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
TRIM2Q9C040 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM2Q9C040 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM2Q9C040 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM2Q9C040 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM2Q9C040 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TRIM2Q9C040 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
TRIM2Q9C040 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms