Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 AC242852.2-201ENST00000615738 1807 ntBASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDHD3Q9BSH5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 ESRRAP2-201ENST00000418437 1549 ntBASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
HDHD3Q9BSH5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HDHD3Q9BSH5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDHD3Q9BSH5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDHD3Q9BSH5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDHD3Q9BSH5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDHD3Q9BSH5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDHD3Q9BSH5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HDHD3Q9BSH5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.78■□□□□ 0.6
HDHD3Q9BSH5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDHD3Q9BSH5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HDHD3Q9BSH5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HDHD3Q9BSH5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HDHD3Q9BSH5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
HDHD3Q9BSH5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 AC074183.2-201ENST00000623112 922 ntBASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HDHD3Q9BSH5 AC007375.3-201ENST00000600936 2314 ntBASIC18.75■□□□□ 0.59
HDHD3Q9BSH5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HDHD3Q9BSH5 TSPY13P-201ENST00000338964 914 ntBASIC18.75■□□□□ 0.59
HDHD3Q9BSH5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.75■□□□□ 0.59
HDHD3Q9BSH5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.75■□□□□ 0.59
HDHD3Q9BSH5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HDHD3Q9BSH5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
HDHD3Q9BSH5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDHD3Q9BSH5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDHD3Q9BSH5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDHD3Q9BSH5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDHD3Q9BSH5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDHD3Q9BSH5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.74■□□□□ 0.59
HDHD3Q9BSH5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDHD3Q9BSH5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.74■□□□□ 0.59
HDHD3Q9BSH5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HDHD3Q9BSH5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms