Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC38A3Q99624 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC38A3Q99624 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC38A3Q99624 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.65■■□□□ 1.06
SLC38A3Q99624 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC38A3Q99624 AL499627.2-201ENST00000606283 725 ntBASIC21.65■■□□□ 1.06
SLC38A3Q99624 LINC01529-204ENST00000636474 1715 ntBASIC21.65■■□□□ 1.06
SLC38A3Q99624 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SLC38A3Q99624 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.64■■□□□ 1.06
SLC38A3Q99624 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC38A3Q99624 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC38A3Q99624 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC38A3Q99624 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.64■■□□□ 1.05
SLC38A3Q99624 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC38A3Q99624 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC38A3Q99624 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC38A3Q99624 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC38A3Q99624 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SLC38A3Q99624 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC38A3Q99624 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC38A3Q99624 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC38A3Q99624 SLC47A1P1-202ENST00000449666 945 ntBASIC21.63■■□□□ 1.05
SLC38A3Q99624 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SLC38A3Q99624 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC38A3Q99624 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC38A3Q99624 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC38A3Q99624 AC004812.2-201ENST00000611079 2094 ntBASIC21.63■■□□□ 1.05
SLC38A3Q99624 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC38A3Q99624 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A3Q99624 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A3Q99624 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A3Q99624 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC38A3Q99624 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SLC38A3Q99624 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.62■■□□□ 1.05
SLC38A3Q99624 AC026271.2-201ENST00000428091 497 ntBASIC21.62■■□□□ 1.05
SLC38A3Q99624 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A3Q99624 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A3Q99624 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC38A3Q99624 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.62■■□□□ 1.05
SLC38A3Q99624 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SLC38A3Q99624 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A3Q99624 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SLC38A3Q99624 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A3Q99624 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A3Q99624 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A3Q99624 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A3Q99624 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
SLC38A3Q99624 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SLC38A3Q99624 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A3Q99624 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SLC38A3Q99624 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A3Q99624 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A3Q99624 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC38A3Q99624 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC38A3Q99624 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC38A3Q99624 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A3Q99624 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC38A3Q99624 MIR5787-201ENST00000611784 55 ntBASIC21.6■■□□□ 1.05
SLC38A3Q99624 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SLC38A3Q99624 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A3Q99624 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A3Q99624 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A3Q99624 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A3Q99624 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC38A3Q99624 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
SLC38A3Q99624 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
SLC38A3Q99624 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC38A3Q99624 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC38A3Q99624 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC38A3Q99624 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC38A3Q99624 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC38A3Q99624 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
SLC38A3Q99624 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SLC38A3Q99624 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC38A3Q99624 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC38A3Q99624 TSPY26P-201ENST00000476365 1326 ntBASIC21.58■■□□□ 1.05
SLC38A3Q99624 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC38A3Q99624 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC38A3Q99624 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC38A3Q99624 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC38A3Q99624 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC38A3Q99624 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.58■■□□□ 1.04
SLC38A3Q99624 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.58■■□□□ 1.04
SLC38A3Q99624 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLC38A3Q99624 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC38A3Q99624 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC38A3Q99624 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC38A3Q99624 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A3Q99624 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A3Q99624 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A3Q99624 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SLC38A3Q99624 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A3Q99624 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SLC38A3Q99624 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC38A3Q99624 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A3Q99624 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A3Q99624 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC38A3Q99624 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC38A3Q99624 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SLC38A3Q99624 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms