Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PKP4Q99569 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PKP4Q99569 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PKP4Q99569 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.73■■□□□ 1.07
PKP4Q99569 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.73■■□□□ 1.07
PKP4Q99569 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PKP4Q99569 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.72■■□□□ 1.07
PKP4Q99569 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PKP4Q99569 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.72■■□□□ 1.07
PKP4Q99569 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PKP4Q99569 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PKP4Q99569 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PKP4Q99569 MIR4466-201ENST00000606121 54 ntBASIC21.72■■□□□ 1.07
PKP4Q99569 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.72■■□□□ 1.07
PKP4Q99569 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PKP4Q99569 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.72■■□□□ 1.07
PKP4Q99569 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PKP4Q99569 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PKP4Q99569 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.71■■□□□ 1.07
PKP4Q99569 AC131281.2-201ENST00000520478 145 ntBASIC21.71■■□□□ 1.07
PKP4Q99569 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.71■■□□□ 1.07
PKP4Q99569 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.71■■□□□ 1.07
PKP4Q99569 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PKP4Q99569 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.71■■□□□ 1.07
PKP4Q99569 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PKP4Q99569 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.7■■□□□ 1.07
PKP4Q99569 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PKP4Q99569 C9orf163-202ENST00000624034 2573 ntBASIC21.7■■□□□ 1.06
PKP4Q99569 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.7■■□□□ 1.06
PKP4Q99569 DUX4L4-201ENST00000566884 1269 ntBASIC21.7■■□□□ 1.06
PKP4Q99569 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PKP4Q99569 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.7■■□□□ 1.06
PKP4Q99569 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.7■■□□□ 1.06
PKP4Q99569 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
PKP4Q99569 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.7■■□□□ 1.06
PKP4Q99569 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PKP4Q99569 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PKP4Q99569 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PKP4Q99569 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PKP4Q99569 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.69■■□□□ 1.06
PKP4Q99569 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
PKP4Q99569 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PKP4Q99569 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.69■■□□□ 1.06
PKP4Q99569 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PKP4Q99569 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PKP4Q99569 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PKP4Q99569 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.69■■□□□ 1.06
PKP4Q99569 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PKP4Q99569 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PKP4Q99569 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PKP4Q99569 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.68■■□□□ 1.06
PKP4Q99569 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PKP4Q99569 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.68■■□□□ 1.06
PKP4Q99569 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
PKP4Q99569 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PKP4Q99569 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PKP4Q99569 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PKP4Q99569 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PKP4Q99569 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PKP4Q99569 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
PKP4Q99569 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
PKP4Q99569 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PKP4Q99569 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.68■■□□□ 1.06
PKP4Q99569 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.67■■□□□ 1.06
PKP4Q99569 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PKP4Q99569 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PKP4Q99569 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PKP4Q99569 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PKP4Q99569 SRD5A1P1-201ENST00000442297 786 ntBASIC21.67■■□□□ 1.06
PKP4Q99569 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.67■■□□□ 1.06
PKP4Q99569 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PKP4Q99569 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PKP4Q99569 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PKP4Q99569 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PKP4Q99569 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.66■■□□□ 1.06
PKP4Q99569 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PKP4Q99569 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.66■■□□□ 1.06
PKP4Q99569 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
PKP4Q99569 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PKP4Q99569 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PKP4Q99569 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.66■■□□□ 1.06
PKP4Q99569 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.66■■□□□ 1.06
PKP4Q99569 AC099791.2-201ENST00000605725 427 ntBASIC21.66■■□□□ 1.06
PKP4Q99569 AC241377.3-202ENST00000626088 1088 ntBASIC21.66■■□□□ 1.06
PKP4Q99569 AC241585.3-202ENST00000628937 1088 ntBASIC21.66■■□□□ 1.06
PKP4Q99569 AC245100.8-202ENST00000629247 1058 ntBASIC21.66■■□□□ 1.06
PKP4Q99569 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PKP4Q99569 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PKP4Q99569 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.66■■□□□ 1.06
PKP4Q99569 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PKP4Q99569 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PKP4Q99569 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PKP4Q99569 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.65■■□□□ 1.06
PKP4Q99569 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PKP4Q99569 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.65■■□□□ 1.06
PKP4Q99569 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.65■■□□□ 1.06
PKP4Q99569 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.65■■□□□ 1.06
PKP4Q99569 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PKP4Q99569 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PKP4Q99569 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms