Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCGB3A1Q96QR1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCGB3A1Q96QR1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCGB3A1Q96QR1 KRT18P10-201ENST00000388836 1287 ntBASIC15.92■□□□□ 0.14
SCGB3A1Q96QR1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCGB3A1Q96QR1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCGB3A1Q96QR1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.92■□□□□ 0.14
SCGB3A1Q96QR1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.92■□□□□ 0.14
SCGB3A1Q96QR1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
SCGB3A1Q96QR1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 AC092053.2-201ENST00000640557 1818 ntBASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.91■□□□□ 0.14
SCGB3A1Q96QR1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 SMPD5-203ENST00000639008 1464 ntBASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCGB3A1Q96QR1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCGB3A1Q96QR1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SCGB3A1Q96QR1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 FBXW4P1-201ENST00000426721 2239 ntBASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 AL157400.5-201ENST00000507624 621 ntBASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SCGB3A1Q96QR1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms