Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 AC136469.2-201ENST00000623944 1028 ntBASIC17.31■□□□□ 0.36
RAX2Q96IS3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RAX2Q96IS3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAX2Q96IS3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.31■□□□□ 0.36
RAX2Q96IS3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.31■□□□□ 0.36
RAX2Q96IS3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAX2Q96IS3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAX2Q96IS3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RAX2Q96IS3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAX2Q96IS3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAX2Q96IS3 AC091305.1-201ENST00000479476 895 ntBASIC17.3■□□□□ 0.36
RAX2Q96IS3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.3■□□□□ 0.36
RAX2Q96IS3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.3■□□□□ 0.36
RAX2Q96IS3 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.3■□□□□ 0.36
RAX2Q96IS3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.3■□□□□ 0.36
RAX2Q96IS3 AC141586.4-201ENST00000624558 1573 ntBASIC17.3■□□□□ 0.36
RAX2Q96IS3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAX2Q96IS3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAX2Q96IS3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAX2Q96IS3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAX2Q96IS3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAX2Q96IS3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAX2Q96IS3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAX2Q96IS3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAX2Q96IS3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.29■□□□□ 0.36
RAX2Q96IS3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAX2Q96IS3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.29■□□□□ 0.36
RAX2Q96IS3 AC027682.1-201ENST00000562846 899 ntBASIC17.29■□□□□ 0.36
RAX2Q96IS3 AC008764.7-201ENST00000593779 1081 ntBASIC17.29■□□□□ 0.36
RAX2Q96IS3 pRNA.6-201ENST00000610482 90 ntBASIC17.29■□□□□ 0.36
RAX2Q96IS3 pRNA.5-201ENST00000612139 90 ntBASIC17.29■□□□□ 0.36
RAX2Q96IS3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RAX2Q96IS3 pRNA.11-201ENST00000618423 90 ntBASIC17.29■□□□□ 0.36
RAX2Q96IS3 pRNA.13-201ENST00000619112 90 ntBASIC17.29■□□□□ 0.36
RAX2Q96IS3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.29■□□□□ 0.36
RAX2Q96IS3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.29■□□□□ 0.36
RAX2Q96IS3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RAX2Q96IS3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAX2Q96IS3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.28■□□□□ 0.36
RAX2Q96IS3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.28■□□□□ 0.36
RAX2Q96IS3 LINC01124-201ENST00000409786 2117 ntBASIC17.28■□□□□ 0.36
RAX2Q96IS3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.28■□□□□ 0.36
RAX2Q96IS3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.28■□□□□ 0.36
RAX2Q96IS3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.28■□□□□ 0.36
RAX2Q96IS3 CA15P2-201ENST00000611168 834 ntBASIC17.28■□□□□ 0.36
RAX2Q96IS3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.28■□□□□ 0.36
RAX2Q96IS3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAX2Q96IS3 RASA4CP-201ENST00000424092 1398 ntBASIC17.28■□□□□ 0.36
RAX2Q96IS3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAX2Q96IS3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAX2Q96IS3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAX2Q96IS3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAX2Q96IS3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.27■□□□□ 0.36
RAX2Q96IS3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.27■□□□□ 0.36
RAX2Q96IS3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.27■□□□□ 0.36
RAX2Q96IS3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.27■□□□□ 0.36
RAX2Q96IS3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.27■□□□□ 0.36
RAX2Q96IS3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAX2Q96IS3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
RAX2Q96IS3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RAX2Q96IS3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAX2Q96IS3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAX2Q96IS3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAX2Q96IS3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAX2Q96IS3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAX2Q96IS3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.26■□□□□ 0.35
RAX2Q96IS3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.26■□□□□ 0.35
RAX2Q96IS3 AC099791.1-201ENST00000416440 715 ntBASIC17.26■□□□□ 0.35
RAX2Q96IS3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.26■□□□□ 0.35
RAX2Q96IS3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.26■□□□□ 0.35
RAX2Q96IS3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.26■□□□□ 0.35
RAX2Q96IS3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RAX2Q96IS3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 LINC00543-201ENST00000567234 1845 ntBASIC17.26■□□□□ 0.35
RAX2Q96IS3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAX2Q96IS3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms