Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
TIMD4Q96H15 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TIMD4Q96H15 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TIMD4Q96H15 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TIMD4Q96H15 DUX4L4-201ENST00000566884 1269 ntBASIC18.74■□□□□ 0.59
TIMD4Q96H15 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TIMD4Q96H15 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TIMD4Q96H15 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TIMD4Q96H15 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TIMD4Q96H15 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TIMD4Q96H15 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TIMD4Q96H15 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TIMD4Q96H15 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TIMD4Q96H15 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TIMD4Q96H15 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.73■□□□□ 0.59
TIMD4Q96H15 BX842568.3-201ENST00000418104 571 ntBASIC18.73■□□□□ 0.59
TIMD4Q96H15 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.73■□□□□ 0.59
TIMD4Q96H15 AC233992.3-201ENST00000607491 485 ntBASIC18.73■□□□□ 0.59
TIMD4Q96H15 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TIMD4Q96H15 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TIMD4Q96H15 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TIMD4Q96H15 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.73■□□□□ 0.59
TIMD4Q96H15 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TIMD4Q96H15 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TIMD4Q96H15 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
TIMD4Q96H15 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TIMD4Q96H15 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TIMD4Q96H15 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TIMD4Q96H15 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TIMD4Q96H15 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TIMD4Q96H15 CA15P2-201ENST00000611168 834 ntBASIC18.72■□□□□ 0.59
TIMD4Q96H15 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.72■□□□□ 0.59
TIMD4Q96H15 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.72■□□□□ 0.59
TIMD4Q96H15 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TIMD4Q96H15 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TIMD4Q96H15 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.72■□□□□ 0.59
TIMD4Q96H15 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TIMD4Q96H15 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TIMD4Q96H15 AC004812.2-201ENST00000611079 2094 ntBASIC18.72■□□□□ 0.59
TIMD4Q96H15 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TIMD4Q96H15 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.72■□□□□ 0.59
TIMD4Q96H15 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TIMD4Q96H15 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.71■□□□□ 0.59
TIMD4Q96H15 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TIMD4Q96H15 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TIMD4Q96H15 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TIMD4Q96H15 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TIMD4Q96H15 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.71■□□□□ 0.59
TIMD4Q96H15 AC099791.1-201ENST00000416440 715 ntBASIC18.71■□□□□ 0.59
TIMD4Q96H15 AC105265.2-201ENST00000467189 838 ntBASIC18.71■□□□□ 0.59
TIMD4Q96H15 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.71■□□□□ 0.59
TIMD4Q96H15 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.71■□□□□ 0.59
TIMD4Q96H15 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TIMD4Q96H15 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 AC133637.1-201ENST00000624115 1537 ntBASIC18.7■□□□□ 0.58
TIMD4Q96H15 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIMD4Q96H15 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIMD4Q96H15 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIMD4Q96H15 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIMD4Q96H15 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIMD4Q96H15 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIMD4Q96H15 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIMD4Q96H15 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.7■□□□□ 0.58
TIMD4Q96H15 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TIMD4Q96H15 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.7■□□□□ 0.58
TIMD4Q96H15 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIMD4Q96H15 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TIMD4Q96H15 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TIMD4Q96H15 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.69■□□□□ 0.58
TIMD4Q96H15 AC126544.1-201ENST00000580842 1059 ntBASIC18.69■□□□□ 0.58
TIMD4Q96H15 AL499627.2-201ENST00000606283 725 ntBASIC18.69■□□□□ 0.58
TIMD4Q96H15 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TIMD4Q96H15 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TIMD4Q96H15 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TIMD4Q96H15 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TIMD4Q96H15 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TIMD4Q96H15 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TIMD4Q96H15 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.68■□□□□ 0.58
TIMD4Q96H15 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIMD4Q96H15 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.68■□□□□ 0.58
TIMD4Q96H15 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.68■□□□□ 0.58
TIMD4Q96H15 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.68■□□□□ 0.58
TIMD4Q96H15 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.68■□□□□ 0.58
TIMD4Q96H15 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TIMD4Q96H15 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.68■□□□□ 0.58
TIMD4Q96H15 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.68■□□□□ 0.58
TIMD4Q96H15 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIMD4Q96H15 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TIMD4Q96H15 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMD4Q96H15 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms