Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ZNF428Q96B54 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.79■■■□□ 2.2
ZNF428Q96B54 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.79■■■□□ 2.2
ZNF428Q96B54 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ZNF428Q96B54 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ZNF428Q96B54 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC28.79■■■□□ 2.2
ZNF428Q96B54 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.79■■■□□ 2.2
ZNF428Q96B54 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.79■■■□□ 2.2
ZNF428Q96B54 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
ZNF428Q96B54 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.79■■■□□ 2.2
ZNF428Q96B54 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
ZNF428Q96B54 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.78■■■□□ 2.2
ZNF428Q96B54 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
ZNF428Q96B54 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.78■■■□□ 2.2
ZNF428Q96B54 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
ZNF428Q96B54 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
ZNF428Q96B54 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.78■■■□□ 2.2
ZNF428Q96B54 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.78■■■□□ 2.2
ZNF428Q96B54 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
ZNF428Q96B54 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC28.77■■■□□ 2.2
ZNF428Q96B54 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ZNF428Q96B54 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ZNF428Q96B54 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ZNF428Q96B54 AC006455.2-201ENST00000429931 906 ntBASIC28.77■■■□□ 2.2
ZNF428Q96B54 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.77■■■□□ 2.2
ZNF428Q96B54 SUDS3P1-201ENST00000505831 966 ntBASIC28.77■■■□□ 2.2
ZNF428Q96B54 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC28.77■■■□□ 2.2
ZNF428Q96B54 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.77■■■□□ 2.2
ZNF428Q96B54 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.77■■■□□ 2.2
ZNF428Q96B54 AL353803.4-201ENST00000565882 1934 ntBASIC28.77■■■□□ 2.2
ZNF428Q96B54 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
ZNF428Q96B54 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.76■■■□□ 2.2
ZNF428Q96B54 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC28.76■■■□□ 2.19
ZNF428Q96B54 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.76■■■□□ 2.19
ZNF428Q96B54 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
ZNF428Q96B54 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
ZNF428Q96B54 AC241377.3-202ENST00000626088 1088 ntBASIC28.76■■■□□ 2.19
ZNF428Q96B54 AC241585.3-202ENST00000628937 1088 ntBASIC28.76■■■□□ 2.19
ZNF428Q96B54 AC245100.8-202ENST00000629247 1058 ntBASIC28.76■■■□□ 2.19
ZNF428Q96B54 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.76■■■□□ 2.19
ZNF428Q96B54 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.76■■■□□ 2.19
ZNF428Q96B54 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ZNF428Q96B54 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ZNF428Q96B54 SERBP1P1-201ENST00000396021 1160 ntBASIC28.75■■■□□ 2.19
ZNF428Q96B54 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ZNF428Q96B54 AC133561.4-201ENST00000566112 224 ntBASIC28.75■■■□□ 2.19
ZNF428Q96B54 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
ZNF428Q96B54 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC28.74■■■□□ 2.19
ZNF428Q96B54 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
ZNF428Q96B54 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ZNF428Q96B54 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
ZNF428Q96B54 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC28.74■■■□□ 2.19
ZNF428Q96B54 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ZNF428Q96B54 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.74■■■□□ 2.19
ZNF428Q96B54 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
ZNF428Q96B54 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ZNF428Q96B54 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.74■■■□□ 2.19
ZNF428Q96B54 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZNF428Q96B54 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.73■■■□□ 2.19
ZNF428Q96B54 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.73■■■□□ 2.19
ZNF428Q96B54 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
ZNF428Q96B54 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ZNF428Q96B54 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZNF428Q96B54 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.73■■■□□ 2.19
ZNF428Q96B54 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.73■■■□□ 2.19
ZNF428Q96B54 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ZNF428Q96B54 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.73■■■□□ 2.19
ZNF428Q96B54 AF213884.3-201ENST00000563833 479 ntBASIC28.73■■■□□ 2.19
ZNF428Q96B54 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZNF428Q96B54 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZNF428Q96B54 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC28.73■■■□□ 2.19
ZNF428Q96B54 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ZNF428Q96B54 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ZNF428Q96B54 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.72■■■□□ 2.19
ZNF428Q96B54 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.72■■■□□ 2.19
ZNF428Q96B54 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
ZNF428Q96B54 MIR4767-201ENST00000582827 78 ntBASIC28.72■■■□□ 2.19
ZNF428Q96B54 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.72■■■□□ 2.19
ZNF428Q96B54 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
ZNF428Q96B54 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ZNF428Q96B54 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.72■■■□□ 2.19
ZNF428Q96B54 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.72■■■□□ 2.19
ZNF428Q96B54 SYT6-210ENST00000641643 1587 ntBASIC28.71■■■□□ 2.19
ZNF428Q96B54 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF428Q96B54 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.71■■■□□ 2.19
ZNF428Q96B54 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF428Q96B54 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF428Q96B54 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.71■■■□□ 2.19
ZNF428Q96B54 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.71■■■□□ 2.19
ZNF428Q96B54 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF428Q96B54 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF428Q96B54 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF428Q96B54 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF428Q96B54 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF428Q96B54 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.18
ZNF428Q96B54 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ZNF428Q96B54 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
ZNF428Q96B54 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
ZNF428Q96B54 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ZNF428Q96B54 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms