Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.64■■□□□ 1.21
CLDN23Q96B33 DUX4L4-201ENST00000566884 1269 ntBASIC22.64■■□□□ 1.21
CLDN23Q96B33 AC104771.1-201ENST00000603335 964 ntBASIC22.64■■□□□ 1.21
CLDN23Q96B33 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLDN23Q96B33 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
CLDN23Q96B33 ABHD17AP1-201ENST00000358206 933 ntBASIC22.63■■□□□ 1.21
CLDN23Q96B33 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.63■■□□□ 1.21
CLDN23Q96B33 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN23Q96B33 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.63■■□□□ 1.21
CLDN23Q96B33 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.63■■□□□ 1.21
CLDN23Q96B33 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.63■■□□□ 1.21
CLDN23Q96B33 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.63■■□□□ 1.21
CLDN23Q96B33 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN23Q96B33 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.63■■□□□ 1.21
CLDN23Q96B33 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CLDN23Q96B33 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.63■■□□□ 1.21
CLDN23Q96B33 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN23Q96B33 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN23Q96B33 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.62■■□□□ 1.21
CLDN23Q96B33 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.62■■□□□ 1.21
CLDN23Q96B33 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.62■■□□□ 1.21
CLDN23Q96B33 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN23Q96B33 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.62■■□□□ 1.21
CLDN23Q96B33 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.62■■□□□ 1.21
CLDN23Q96B33 DUSP8P4-201ENST00000399538 1761 ntBASIC22.62■■□□□ 1.21
CLDN23Q96B33 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN23Q96B33 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN23Q96B33 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.62■■□□□ 1.21
CLDN23Q96B33 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN23Q96B33 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
CLDN23Q96B33 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN23Q96B33 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN23Q96B33 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.61■■□□□ 1.21
CLDN23Q96B33 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.61■■□□□ 1.21
CLDN23Q96B33 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.61■■□□□ 1.21
CLDN23Q96B33 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN23Q96B33 TPRG1LP1-201ENST00000598702 760 ntBASIC22.61■■□□□ 1.21
CLDN23Q96B33 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.61■■□□□ 1.21
CLDN23Q96B33 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN23Q96B33 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN23Q96B33 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN23Q96B33 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.6■■□□□ 1.21
CLDN23Q96B33 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.6■■□□□ 1.21
CLDN23Q96B33 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
CLDN23Q96B33 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.6■■□□□ 1.21
CLDN23Q96B33 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.6■■□□□ 1.21
CLDN23Q96B33 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN23Q96B33 AP004607.4-201ENST00000530158 1459 ntBASIC22.6■■□□□ 1.21
CLDN23Q96B33 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CLDN23Q96B33 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.59■■□□□ 1.21
CLDN23Q96B33 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.59■■□□□ 1.21
CLDN23Q96B33 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.59■■□□□ 1.21
CLDN23Q96B33 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CLDN23Q96B33 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.59■■□□□ 1.21
CLDN23Q96B33 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.59■■□□□ 1.21
CLDN23Q96B33 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN23Q96B33 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.58■■□□□ 1.21
CLDN23Q96B33 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN23Q96B33 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN23Q96B33 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN23Q96B33 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.58■■□□□ 1.21
CLDN23Q96B33 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.58■■□□□ 1.21
CLDN23Q96B33 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.58■■□□□ 1.21
CLDN23Q96B33 BID-214ENST00000617586 542 ntTSL 5 BASIC22.58■■□□□ 1.21
CLDN23Q96B33 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
CLDN23Q96B33 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.58■■□□□ 1.2
CLDN23Q96B33 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
CLDN23Q96B33 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.58■■□□□ 1.2
CLDN23Q96B33 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN23Q96B33 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CLDN23Q96B33 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.57■■□□□ 1.2
CLDN23Q96B33 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.57■■□□□ 1.2
CLDN23Q96B33 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.57■■□□□ 1.2
CLDN23Q96B33 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN23Q96B33 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.57■■□□□ 1.2
CLDN23Q96B33 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CLDN23Q96B33 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN23Q96B33 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.57■■□□□ 1.2
CLDN23Q96B33 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN23Q96B33 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN23Q96B33 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CLDN23Q96B33 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.57■■□□□ 1.2
CLDN23Q96B33 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN23Q96B33 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN23Q96B33 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.56■■□□□ 1.2
CLDN23Q96B33 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN23Q96B33 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.56■■□□□ 1.2
CLDN23Q96B33 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN23Q96B33 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN23Q96B33 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms