Protein–RNA interactions for Protein: Q92928

RAB1C, Putative Ras-related protein Rab-1C, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1CQ92928 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB1CQ92928 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB1CQ92928 MIR4767-201ENST00000582827 78 ntBASIC18.82■□□□□ 0.6
RAB1CQ92928 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB1CQ92928 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB1CQ92928 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1CQ92928 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB1CQ92928 FP325331.1-202ENST00000623531 1380 ntBASIC18.81■□□□□ 0.6
RAB1CQ92928 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1CQ92928 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1CQ92928 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB1CQ92928 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1CQ92928 AC006455.2-201ENST00000429931 906 ntBASIC18.81■□□□□ 0.6
RAB1CQ92928 SUDS3P1-201ENST00000505831 966 ntBASIC18.81■□□□□ 0.6
RAB1CQ92928 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1CQ92928 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB1CQ92928 MIR3181-201ENST00000578512 73 ntBASIC18.81■□□□□ 0.6
RAB1CQ92928 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB1CQ92928 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB1CQ92928 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.81■□□□□ 0.6
RAB1CQ92928 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAB1CQ92928 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1CQ92928 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAB1CQ92928 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1CQ92928 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
RAB1CQ92928 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB1CQ92928 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB1CQ92928 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB1CQ92928 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RAB1CQ92928 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1CQ92928 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1CQ92928 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1CQ92928 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAB1CQ92928 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1CQ92928 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1CQ92928 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB1CQ92928 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB1CQ92928 pRNA.6-201ENST00000610482 90 ntBASIC18.8■□□□□ 0.6
RAB1CQ92928 pRNA.5-201ENST00000612139 90 ntBASIC18.8■□□□□ 0.6
RAB1CQ92928 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB1CQ92928 pRNA.11-201ENST00000618423 90 ntBASIC18.8■□□□□ 0.6
RAB1CQ92928 pRNA.13-201ENST00000619112 90 ntBASIC18.8■□□□□ 0.6
RAB1CQ92928 AC136469.2-201ENST00000623944 1028 ntBASIC18.8■□□□□ 0.6
RAB1CQ92928 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1CQ92928 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1CQ92928 AC068473.5-201ENST00000616428 2072 ntBASIC18.8■□□□□ 0.6
RAB1CQ92928 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RAB1CQ92928 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1CQ92928 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB1CQ92928 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1CQ92928 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1CQ92928 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1CQ92928 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1CQ92928 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB1CQ92928 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB1CQ92928 AL031432.3-201ENST00000607698 485 ntBASIC18.79■□□□□ 0.6
RAB1CQ92928 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB1CQ92928 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1CQ92928 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1CQ92928 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB1CQ92928 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RAB1CQ92928 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB1CQ92928 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RAB1CQ92928 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1CQ92928 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1CQ92928 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1CQ92928 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB1CQ92928 AF213884.3-201ENST00000563833 479 ntBASIC18.78■□□□□ 0.6
RAB1CQ92928 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RAB1CQ92928 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB1CQ92928 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1CQ92928 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1CQ92928 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RAB1CQ92928 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1CQ92928 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB1CQ92928 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RAB1CQ92928 AC091305.1-201ENST00000479476 895 ntBASIC18.77■□□□□ 0.6
RAB1CQ92928 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB1CQ92928 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1CQ92928 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAB1CQ92928 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
RAB1CQ92928 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
RAB1CQ92928 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB1CQ92928 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB1CQ92928 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB1CQ92928 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB1CQ92928 MIR939-201ENST00000401314 82 ntBASIC18.76■□□□□ 0.59
RAB1CQ92928 AP001330.3-201ENST00000520123 633 ntBASIC18.76■□□□□ 0.59
RAB1CQ92928 AC027682.1-201ENST00000562846 899 ntBASIC18.76■□□□□ 0.59
RAB1CQ92928 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms