Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF138Q8WVD3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF138Q8WVD3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF138Q8WVD3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF138Q8WVD3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF138Q8WVD3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF138Q8WVD3 AC136469.2-201ENST00000623944 1028 ntBASIC20.34■□□□□ 0.85
RNF138Q8WVD3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF138Q8WVD3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 AL139246.5-201ENST00000606645 996 ntBASIC20.33■□□□□ 0.85
RNF138Q8WVD3 AC106739.1-201ENST00000617035 715 ntBASIC20.33■□□□□ 0.85
RNF138Q8WVD3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF138Q8WVD3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF138Q8WVD3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RNF138Q8WVD3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF138Q8WVD3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RNF138Q8WVD3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.32■□□□□ 0.84
RNF138Q8WVD3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 AL136162.1-201ENST00000607711 1078 ntBASIC20.32■□□□□ 0.84
RNF138Q8WVD3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 AC133637.1-201ENST00000624115 1537 ntBASIC20.32■□□□□ 0.84
RNF138Q8WVD3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF138Q8WVD3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 AC024257.2-201ENST00000549699 147 ntBASIC20.31■□□□□ 0.84
RNF138Q8WVD3 AC133561.4-201ENST00000566112 224 ntBASIC20.31■□□□□ 0.84
RNF138Q8WVD3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 DUSP8P5-201ENST00000422884 1815 ntBASIC20.31■□□□□ 0.84
RNF138Q8WVD3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF138Q8WVD3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 AC135279.3-201ENST00000610945 1311 ntBASIC20.3■□□□□ 0.84
RNF138Q8WVD3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF138Q8WVD3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF138Q8WVD3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF138Q8WVD3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF138Q8WVD3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF138Q8WVD3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF138Q8WVD3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF138Q8WVD3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RNF138Q8WVD3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF138Q8WVD3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 AL031432.3-201ENST00000607698 485 ntBASIC20.28■□□□□ 0.84
RNF138Q8WVD3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF138Q8WVD3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF138Q8WVD3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms