Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 ECEL1P1-201ENST00000373592 1742 ntBASIC23.16■■□□□ 1.3
CCHCR1Q8TD31 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCHCR1Q8TD31 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCHCR1Q8TD31 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCHCR1Q8TD31 AC127496.7-201ENST00000625110 1798 ntBASIC23.15■■□□□ 1.3
CCHCR1Q8TD31 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCHCR1Q8TD31 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.15■■□□□ 1.3
CCHCR1Q8TD31 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.15■■□□□ 1.3
CCHCR1Q8TD31 LINC00526-201ENST00000581067 1875 ntBASIC23.15■■□□□ 1.3
CCHCR1Q8TD31 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCHCR1Q8TD31 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
CCHCR1Q8TD31 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.14■■□□□ 1.29
CCHCR1Q8TD31 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.14■■□□□ 1.29
CCHCR1Q8TD31 MIR4787-201ENST00000607364 84 ntBASIC23.14■■□□□ 1.29
CCHCR1Q8TD31 EP400NL-214ENST00000641289 2402 ntBASIC23.14■■□□□ 1.29
CCHCR1Q8TD31 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CCHCR1Q8TD31 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCHCR1Q8TD31 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCHCR1Q8TD31 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCHCR1Q8TD31 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCHCR1Q8TD31 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.13■■□□□ 1.29
CCHCR1Q8TD31 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.13■■□□□ 1.29
CCHCR1Q8TD31 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCHCR1Q8TD31 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCHCR1Q8TD31 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCHCR1Q8TD31 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CCHCR1Q8TD31 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.13■■□□□ 1.29
CCHCR1Q8TD31 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.13■■□□□ 1.29
CCHCR1Q8TD31 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
CCHCR1Q8TD31 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 AC079630.1-202ENST00000618127 1840 ntBASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.11■■□□□ 1.29
CCHCR1Q8TD31 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCHCR1Q8TD31 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.1■■□□□ 1.29
CCHCR1Q8TD31 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.1■■□□□ 1.29
CCHCR1Q8TD31 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCHCR1Q8TD31 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCHCR1Q8TD31 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCHCR1Q8TD31 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCHCR1Q8TD31 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
CCHCR1Q8TD31 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCHCR1Q8TD31 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CCHCR1Q8TD31 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCHCR1Q8TD31 AC004448.1-201ENST00000458332 883 ntBASIC23.09■■□□□ 1.29
CCHCR1Q8TD31 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCHCR1Q8TD31 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.09■■□□□ 1.29
CCHCR1Q8TD31 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCHCR1Q8TD31 LINC00565-201ENST00000562710 2331 ntBASIC23.09■■□□□ 1.29
CCHCR1Q8TD31 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCHCR1Q8TD31 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCHCR1Q8TD31 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.08■■□□□ 1.29
CCHCR1Q8TD31 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.08■■□□□ 1.29
CCHCR1Q8TD31 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.08■■□□□ 1.29
CCHCR1Q8TD31 AC092028.1-203ENST00000608262 953 ntBASIC23.08■■□□□ 1.29
CCHCR1Q8TD31 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCHCR1Q8TD31 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.08■■□□□ 1.29
CCHCR1Q8TD31 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCHCR1Q8TD31 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
CCHCR1Q8TD31 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCHCR1Q8TD31 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
CCHCR1Q8TD31 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.07■■□□□ 1.28
CCHCR1Q8TD31 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms