Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM11BQ8TCY0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.49□□□□□ -0.09
SMIM11BQ8TCY0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SMIM11BQ8TCY0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.48□□□□□ -0.09
SMIM11BQ8TCY0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SMIM11BQ8TCY0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 HES6-205ENST00000409356 528 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 AC025884.2-201ENST00000553429 711 ntBASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SMIM11BQ8TCY0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11BQ8TCY0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11BQ8TCY0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11BQ8TCY0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11BQ8TCY0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11BQ8TCY0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11BQ8TCY0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11BQ8TCY0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11BQ8TCY0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SMIM11BQ8TCY0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM11BQ8TCY0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms