Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.96■■□□□ 1.11
HMGCLL1Q8TB92 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCLL1Q8TB92 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCLL1Q8TB92 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
HMGCLL1Q8TB92 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLL1Q8TB92 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
HMGCLL1Q8TB92 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.95■■□□□ 1.1
HMGCLL1Q8TB92 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLL1Q8TB92 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLL1Q8TB92 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.95■■□□□ 1.1
HMGCLL1Q8TB92 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
HMGCLL1Q8TB92 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLL1Q8TB92 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLL1Q8TB92 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGCLL1Q8TB92 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 AL356740.2-201ENST00000601559 647 ntBASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
HMGCLL1Q8TB92 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HMGCLL1Q8TB92 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.92■■□□□ 1.1
HMGCLL1Q8TB92 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HMGCLL1Q8TB92 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.91■■□□□ 1.1
HMGCLL1Q8TB92 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLL1Q8TB92 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLL1Q8TB92 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLL1Q8TB92 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLL1Q8TB92 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLL1Q8TB92 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMGCLL1Q8TB92 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGCLL1Q8TB92 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMGCLL1Q8TB92 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
HMGCLL1Q8TB92 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLL1Q8TB92 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
HMGCLL1Q8TB92 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.89■■□□□ 1.09
HMGCLL1Q8TB92 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLL1Q8TB92 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.89■■□□□ 1.09
HMGCLL1Q8TB92 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGCLL1Q8TB92 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLL1Q8TB92 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLL1Q8TB92 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLL1Q8TB92 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLL1Q8TB92 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLL1Q8TB92 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLL1Q8TB92 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
HMGCLL1Q8TB92 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLL1Q8TB92 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLL1Q8TB92 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HMGCLL1Q8TB92 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLL1Q8TB92 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms