Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SVIPQ8NHG7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SVIPQ8NHG7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.16□□□□□ -0.14
SVIPQ8NHG7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.15□□□□□ -0.14
SVIPQ8NHG7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 AC009053.2-201ENST00000563701 2365 ntBASIC14.14□□□□□ -0.15
SVIPQ8NHG7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SVIPQ8NHG7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SVIPQ8NHG7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SVIPQ8NHG7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SVIPQ8NHG7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SVIPQ8NHG7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SVIPQ8NHG7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SVIPQ8NHG7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SVIPQ8NHG7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SVIPQ8NHG7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms