Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
LINC00116Q8NCU8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.71■■■□□ 2.19
LINC00116Q8NCU8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
LINC00116Q8NCU8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.71■■■□□ 2.19
LINC00116Q8NCU8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
LINC00116Q8NCU8 CDCA4P2-201ENST00000441182 718 ntBASIC28.71■■■□□ 2.19
LINC00116Q8NCU8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC28.71■■■□□ 2.19
LINC00116Q8NCU8 AC105233.4-201ENST00000642045 216 ntBASIC28.71■■■□□ 2.19
LINC00116Q8NCU8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.71■■■□□ 2.19
LINC00116Q8NCU8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
LINC00116Q8NCU8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
LINC00116Q8NCU8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.7■■■□□ 2.19
LINC00116Q8NCU8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.7■■■□□ 2.19
LINC00116Q8NCU8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.7■■■□□ 2.19
LINC00116Q8NCU8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
LINC00116Q8NCU8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC28.7■■■□□ 2.18
LINC00116Q8NCU8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC28.7■■■□□ 2.18
LINC00116Q8NCU8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
LINC00116Q8NCU8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
LINC00116Q8NCU8 AP005435.1-201ENST00000529293 1178 ntBASIC28.7■■■□□ 2.18
LINC00116Q8NCU8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC28.7■■■□□ 2.18
LINC00116Q8NCU8 GXYLT1P5-201ENST00000614548 1189 ntBASIC28.7■■■□□ 2.18
LINC00116Q8NCU8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC28.69■■■□□ 2.18
LINC00116Q8NCU8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LINC00116Q8NCU8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
LINC00116Q8NCU8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
LINC00116Q8NCU8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LINC00116Q8NCU8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.69■■■□□ 2.18
LINC00116Q8NCU8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.69■■■□□ 2.18
LINC00116Q8NCU8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
LINC00116Q8NCU8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
LINC00116Q8NCU8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
LINC00116Q8NCU8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.68■■■□□ 2.18
LINC00116Q8NCU8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.68■■■□□ 2.18
LINC00116Q8NCU8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC28.68■■■□□ 2.18
LINC00116Q8NCU8 AC073111.5-205ENST00000641717 521 ntBASIC28.68■■■□□ 2.18
LINC00116Q8NCU8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
LINC00116Q8NCU8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
LINC00116Q8NCU8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
LINC00116Q8NCU8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
LINC00116Q8NCU8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
LINC00116Q8NCU8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC28.67■■■□□ 2.18
LINC00116Q8NCU8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
LINC00116Q8NCU8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
LINC00116Q8NCU8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.67■■■□□ 2.18
LINC00116Q8NCU8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
LINC00116Q8NCU8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 DUX4L4-201ENST00000566884 1269 ntBASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.66■■■□□ 2.18
LINC00116Q8NCU8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
LINC00116Q8NCU8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
LINC00116Q8NCU8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC28.65■■■□□ 2.18
LINC00116Q8NCU8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC28.65■■■□□ 2.18
LINC00116Q8NCU8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC28.65■■■□□ 2.18
LINC00116Q8NCU8 AC145676.1-201ENST00000514988 2004 ntBASIC28.65■■■□□ 2.18
LINC00116Q8NCU8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
LINC00116Q8NCU8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
LINC00116Q8NCU8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.18
LINC00116Q8NCU8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
LINC00116Q8NCU8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC28.64■■■□□ 2.18
LINC00116Q8NCU8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.64■■■□□ 2.18
LINC00116Q8NCU8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
LINC00116Q8NCU8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
LINC00116Q8NCU8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
LINC00116Q8NCU8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC28.64■■■□□ 2.18
LINC00116Q8NCU8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
LINC00116Q8NCU8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
LINC00116Q8NCU8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.63■■■□□ 2.17
LINC00116Q8NCU8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
LINC00116Q8NCU8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
LINC00116Q8NCU8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC28.63■■■□□ 2.17
LINC00116Q8NCU8 TPRG1LP1-201ENST00000598702 760 ntBASIC28.63■■■□□ 2.17
LINC00116Q8NCU8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.62■■■□□ 2.17
LINC00116Q8NCU8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC28.62■■■□□ 2.17
LINC00116Q8NCU8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC28.62■■■□□ 2.17
LINC00116Q8NCU8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC28.62■■■□□ 2.17
LINC00116Q8NCU8 AC137761.2-201ENST00000561729 223 ntBASIC28.62■■■□□ 2.17
LINC00116Q8NCU8 AC145350.3-201ENST00000569033 163 ntBASIC28.62■■■□□ 2.17
LINC00116Q8NCU8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC28.62■■■□□ 2.17
LINC00116Q8NCU8 FP325331.1-202ENST00000623531 1380 ntBASIC28.62■■■□□ 2.17
LINC00116Q8NCU8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
LINC00116Q8NCU8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.61■■■□□ 2.17
LINC00116Q8NCU8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
LINC00116Q8NCU8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC28.61■■■□□ 2.17
LINC00116Q8NCU8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
LINC00116Q8NCU8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
LINC00116Q8NCU8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.61■■■□□ 2.17
LINC00116Q8NCU8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
LINC00116Q8NCU8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC28.6■■■□□ 2.17
LINC00116Q8NCU8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms