Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 AC011298.3-201ENST00000615796 283 ntBASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 FP325331.1-202ENST00000623531 1380 ntBASIC22.75■■□□□ 1.23
PCDH20Q8N6Y1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 AC019069.1-201ENST00000610008 1333 ntBASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH20Q8N6Y1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH20Q8N6Y1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH20Q8N6Y1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH20Q8N6Y1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH20Q8N6Y1 AC144652.1-201ENST00000609974 1624 ntBASIC22.73■■□□□ 1.23
PCDH20Q8N6Y1 AC005837.3-201ENST00000612163 286 ntBASIC22.73■■□□□ 1.23
PCDH20Q8N6Y1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH20Q8N6Y1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH20Q8N6Y1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDH20Q8N6Y1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
PCDH20Q8N6Y1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
PCDH20Q8N6Y1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH20Q8N6Y1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH20Q8N6Y1 MIR3181-201ENST00000578512 73 ntBASIC22.72■■□□□ 1.23
PCDH20Q8N6Y1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
PCDH20Q8N6Y1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH20Q8N6Y1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDH20Q8N6Y1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH20Q8N6Y1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDH20Q8N6Y1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 AC012676.1-201ENST00000574705 1949 ntBASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 EDA-201ENST00000338901 1233 ntBASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH20Q8N6Y1 AC068473.5-201ENST00000616428 2072 ntBASIC22.7■■□□□ 1.23
PCDH20Q8N6Y1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH20Q8N6Y1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 DUX4L4-201ENST00000566884 1269 ntBASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.7■■□□□ 1.22
PCDH20Q8N6Y1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 MIR4767-201ENST00000582827 78 ntBASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 pRNA.6-201ENST00000610482 90 ntBASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 pRNA.5-201ENST00000612139 90 ntBASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 pRNA.11-201ENST00000618423 90 ntBASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 pRNA.13-201ENST00000619112 90 ntBASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 AC136469.2-201ENST00000623944 1028 ntBASIC22.69■■□□□ 1.22
PCDH20Q8N6Y1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 AL355001.2-201ENST00000620617 1191 ntBASIC22.68■■□□□ 1.22
PCDH20Q8N6Y1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms