Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00311Q8N616 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00311Q8N616 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LINC00311Q8N616 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
LINC00311Q8N616 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00311Q8N616 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LINC00311Q8N616 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00311Q8N616 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LINC00311Q8N616 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00311Q8N616 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00311Q8N616 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00311Q8N616 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LINC00311Q8N616 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00311Q8N616 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00311Q8N616 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00311Q8N616 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.12■□□□□ 0.49
LINC00311Q8N616 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00311Q8N616 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.12■□□□□ 0.49
LINC00311Q8N616 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LINC00311Q8N616 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.12■□□□□ 0.49
LINC00311Q8N616 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00311Q8N616 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LINC00311Q8N616 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00311Q8N616 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00311Q8N616 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.11■□□□□ 0.49
LINC00311Q8N616 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00311Q8N616 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC00311Q8N616 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00311Q8N616 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00311Q8N616 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00311Q8N616 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC00311Q8N616 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00311Q8N616 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00311Q8N616 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00311Q8N616 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LINC00311Q8N616 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00311Q8N616 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
LINC00311Q8N616 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC00311Q8N616 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC00311Q8N616 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LINC00311Q8N616 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00311Q8N616 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00311Q8N616 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.09■□□□□ 0.49
LINC00311Q8N616 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00311Q8N616 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00311Q8N616 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC00311Q8N616 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LINC00311Q8N616 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.09■□□□□ 0.49
LINC00311Q8N616 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00311Q8N616 AL512631.2-201ENST00000604634 923 ntBASIC18.09■□□□□ 0.49
LINC00311Q8N616 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00311Q8N616 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC00311Q8N616 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00311Q8N616 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00311Q8N616 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00311Q8N616 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00311Q8N616 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00311Q8N616 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.49
LINC00311Q8N616 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LINC00311Q8N616 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00311Q8N616 C9orf163-202ENST00000624034 2573 ntBASIC18.08■□□□□ 0.49
LINC00311Q8N616 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00311Q8N616 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC00311Q8N616 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00311Q8N616 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC00311Q8N616 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC00311Q8N616 AL499627.2-201ENST00000606283 725 ntBASIC18.08■□□□□ 0.48
LINC00311Q8N616 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LINC00311Q8N616 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00311Q8N616 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LINC00311Q8N616 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC00311Q8N616 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC00311Q8N616 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LINC00311Q8N616 ESRRAP2-201ENST00000418437 1549 ntBASIC18.08■□□□□ 0.48
LINC00311Q8N616 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00311Q8N616 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00311Q8N616 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00311Q8N616 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00311Q8N616 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.07■□□□□ 0.48
LINC00311Q8N616 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00311Q8N616 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00311Q8N616 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00311Q8N616 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.07■□□□□ 0.48
LINC00311Q8N616 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00311Q8N616 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00311Q8N616 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00311Q8N616 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00311Q8N616 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00311Q8N616 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC00311Q8N616 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms