Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.87■■□□□ 1.25
ATPAF2Q8N5M1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
ATPAF2Q8N5M1 AC131212.1-201ENST00000613771 668 ntBASIC22.87■■□□□ 1.25
ATPAF2Q8N5M1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATPAF2Q8N5M1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 AL512631.2-201ENST00000604634 923 ntBASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.86■■□□□ 1.25
ATPAF2Q8N5M1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ATPAF2Q8N5M1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ATPAF2Q8N5M1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ATPAF2Q8N5M1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATPAF2Q8N5M1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
ATPAF2Q8N5M1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATPAF2Q8N5M1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.85■■□□□ 1.25
ATPAF2Q8N5M1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
ATPAF2Q8N5M1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATPAF2Q8N5M1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATPAF2Q8N5M1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
ATPAF2Q8N5M1 SRD5A1P1-201ENST00000442297 786 ntBASIC22.83■■□□□ 1.25
ATPAF2Q8N5M1 AC131281.2-201ENST00000520478 145 ntBASIC22.83■■□□□ 1.25
ATPAF2Q8N5M1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.83■■□□□ 1.25
ATPAF2Q8N5M1 DUX4L4-201ENST00000566884 1269 ntBASIC22.83■■□□□ 1.25
ATPAF2Q8N5M1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATPAF2Q8N5M1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.83■■□□□ 1.24
ATPAF2Q8N5M1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
ATPAF2Q8N5M1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
ATPAF2Q8N5M1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.82■■□□□ 1.24
ATPAF2Q8N5M1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
ATPAF2Q8N5M1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATPAF2Q8N5M1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
ATPAF2Q8N5M1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATPAF2Q8N5M1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ATPAF2Q8N5M1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ATPAF2Q8N5M1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.82■■□□□ 1.24
ATPAF2Q8N5M1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.82■■□□□ 1.24
ATPAF2Q8N5M1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 C9orf163-202ENST00000624034 2573 ntBASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 AC241377.3-202ENST00000626088 1088 ntBASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 AC241585.3-202ENST00000628937 1088 ntBASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 AC245100.8-202ENST00000629247 1058 ntBASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.81■■□□□ 1.24
ATPAF2Q8N5M1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 MIR4466-201ENST00000606121 54 ntBASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
ATPAF2Q8N5M1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATPAF2Q8N5M1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.79■■□□□ 1.24
ATPAF2Q8N5M1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATPAF2Q8N5M1 AC009086.3-201ENST00000623486 1008 ntBASIC22.79■■□□□ 1.24
ATPAF2Q8N5M1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.79■■□□□ 1.24
ATPAF2Q8N5M1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.79■■□□□ 1.24
ATPAF2Q8N5M1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATPAF2Q8N5M1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.79■■□□□ 1.24
ATPAF2Q8N5M1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.78■■□□□ 1.24
ATPAF2Q8N5M1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATPAF2Q8N5M1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.78■■□□□ 1.24
ATPAF2Q8N5M1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
ATPAF2Q8N5M1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms