Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
VPS8Q8N3P4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC35.22■■■■□ 3.23
VPS8Q8N3P4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC35.22■■■■□ 3.23
VPS8Q8N3P4 OR2I1P-207ENST00000453522 948 ntBASIC35.22■■■■□ 3.23
VPS8Q8N3P4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC35.22■■■■□ 3.23
VPS8Q8N3P4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
VPS8Q8N3P4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC35.22■■■■□ 3.23
VPS8Q8N3P4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
VPS8Q8N3P4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC35.21■■■■□ 3.23
VPS8Q8N3P4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
VPS8Q8N3P4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
VPS8Q8N3P4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
VPS8Q8N3P4 AC091305.1-201ENST00000479476 895 ntBASIC35.21■■■■□ 3.23
VPS8Q8N3P4 MAG-206ENST00000597035 542 ntTSL 4 BASIC35.21■■■■□ 3.23
VPS8Q8N3P4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
VPS8Q8N3P4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC35.21■■■■□ 3.23
VPS8Q8N3P4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC35.21■■■■□ 3.23
VPS8Q8N3P4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
VPS8Q8N3P4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
VPS8Q8N3P4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC35.2■■■■□ 3.23
VPS8Q8N3P4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
VPS8Q8N3P4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC35.2■■■■□ 3.23
VPS8Q8N3P4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC35.2■■■■□ 3.23
VPS8Q8N3P4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC35.2■■■■□ 3.23
VPS8Q8N3P4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
VPS8Q8N3P4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
VPS8Q8N3P4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC35.19■■■■□ 3.22
VPS8Q8N3P4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC35.19■■■■□ 3.22
VPS8Q8N3P4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
VPS8Q8N3P4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC35.19■■■■□ 3.22
VPS8Q8N3P4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
VPS8Q8N3P4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC35.18■■■■□ 3.22
VPS8Q8N3P4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC35.18■■■■□ 3.22
VPS8Q8N3P4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
VPS8Q8N3P4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
VPS8Q8N3P4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
VPS8Q8N3P4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC35.18■■■■□ 3.22
VPS8Q8N3P4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC35.18■■■■□ 3.22
VPS8Q8N3P4 AL353803.4-201ENST00000565882 1934 ntBASIC35.18■■■■□ 3.22
VPS8Q8N3P4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC35.17■■■■□ 3.22
VPS8Q8N3P4 BX842568.3-201ENST00000418104 571 ntBASIC35.17■■■■□ 3.22
VPS8Q8N3P4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC35.17■■■■□ 3.22
VPS8Q8N3P4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
VPS8Q8N3P4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
VPS8Q8N3P4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC35.16■■■■□ 3.22
VPS8Q8N3P4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC35.16■■■■□ 3.22
VPS8Q8N3P4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC35.16■■■■□ 3.22
VPS8Q8N3P4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
VPS8Q8N3P4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
VPS8Q8N3P4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC35.15■■■■□ 3.22
VPS8Q8N3P4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
VPS8Q8N3P4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 AC099791.1-201ENST00000416440 715 ntBASIC35.14■■■■□ 3.22
VPS8Q8N3P4 RASA4CP-201ENST00000424092 1398 ntBASIC35.14■■■■□ 3.22
VPS8Q8N3P4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 CA15P2-201ENST00000611168 834 ntBASIC35.14■■■■□ 3.22
VPS8Q8N3P4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
VPS8Q8N3P4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
VPS8Q8N3P4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
VPS8Q8N3P4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
VPS8Q8N3P4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC35.13■■■■□ 3.21
VPS8Q8N3P4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC35.13■■■■□ 3.21
VPS8Q8N3P4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
VPS8Q8N3P4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC35.13■■■■□ 3.21
VPS8Q8N3P4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC35.13■■■■□ 3.21
VPS8Q8N3P4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC35.13■■■■□ 3.21
VPS8Q8N3P4 AC010525.1-201ENST00000585559 441 ntBASIC35.13■■■■□ 3.21
VPS8Q8N3P4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC35.12■■■■□ 3.21
VPS8Q8N3P4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
VPS8Q8N3P4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC35.12■■■■□ 3.21
VPS8Q8N3P4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
VPS8Q8N3P4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
VPS8Q8N3P4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC35.12■■■■□ 3.21
VPS8Q8N3P4 ZNRF2P3-201ENST00000424200 374 ntBASIC35.12■■■■□ 3.21
VPS8Q8N3P4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
VPS8Q8N3P4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
VPS8Q8N3P4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
VPS8Q8N3P4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC35.11■■■■□ 3.21
VPS8Q8N3P4 AC105265.2-201ENST00000467189 838 ntBASIC35.11■■■■□ 3.21
VPS8Q8N3P4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC35.11■■■■□ 3.21
VPS8Q8N3P4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
VPS8Q8N3P4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
VPS8Q8N3P4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
VPS8Q8N3P4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
VPS8Q8N3P4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
VPS8Q8N3P4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
VPS8Q8N3P4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC35.1■■■■□ 3.21
VPS8Q8N3P4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
VPS8Q8N3P4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC35.1■■■■□ 3.21
VPS8Q8N3P4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC35.09■■■■□ 3.21
VPS8Q8N3P4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC35.09■■■■□ 3.21
VPS8Q8N3P4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC35.09■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms