Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.76■■■□□ 2.03
SMC5Q8IY18 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
SMC5Q8IY18 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.76■■■□□ 2.03
SMC5Q8IY18 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.76■■■□□ 2.03
SMC5Q8IY18 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.76■■■□□ 2.03
SMC5Q8IY18 ESRRAP2-201ENST00000418437 1549 ntBASIC27.76■■■□□ 2.03
SMC5Q8IY18 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SMC5Q8IY18 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.75■■■□□ 2.03
SMC5Q8IY18 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SMC5Q8IY18 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SMC5Q8IY18 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
SMC5Q8IY18 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SMC5Q8IY18 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.75■■■□□ 2.03
SMC5Q8IY18 AC009299.2-201ENST00000482477 511 ntBASIC27.75■■■□□ 2.03
SMC5Q8IY18 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.75■■■□□ 2.03
SMC5Q8IY18 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
SMC5Q8IY18 AL451085.2-201ENST00000605085 799 ntBASIC27.75■■■□□ 2.03
SMC5Q8IY18 MIR4787-201ENST00000607364 84 ntBASIC27.75■■■□□ 2.03
SMC5Q8IY18 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SMC5Q8IY18 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
SMC5Q8IY18 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SMC5Q8IY18 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
SMC5Q8IY18 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMC5Q8IY18 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC27.74■■■□□ 2.03
SMC5Q8IY18 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMC5Q8IY18 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
SMC5Q8IY18 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMC5Q8IY18 KRT125P-201ENST00000546827 989 ntBASIC27.74■■■□□ 2.03
SMC5Q8IY18 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC27.74■■■□□ 2.03
SMC5Q8IY18 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMC5Q8IY18 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
SMC5Q8IY18 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMC5Q8IY18 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27.74■■■□□ 2.03
SMC5Q8IY18 FP325331.1-202ENST00000623531 1380 ntBASIC27.73■■■□□ 2.03
SMC5Q8IY18 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SMC5Q8IY18 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
SMC5Q8IY18 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
SMC5Q8IY18 ECEL1P1-201ENST00000373592 1742 ntBASIC27.73■■■□□ 2.03
SMC5Q8IY18 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SMC5Q8IY18 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SMC5Q8IY18 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SMC5Q8IY18 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
SMC5Q8IY18 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
SMC5Q8IY18 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SMC5Q8IY18 LSR-203ENST00000360798 1963 ntTSL 2 BASIC27.72■■■□□ 2.03
SMC5Q8IY18 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SMC5Q8IY18 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SMC5Q8IY18 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.71■■■□□ 2.03
SMC5Q8IY18 AC239859.2-201ENST00000444165 318 ntBASIC27.71■■■□□ 2.03
SMC5Q8IY18 LINC01529-204ENST00000636474 1715 ntBASIC27.71■■■□□ 2.03
SMC5Q8IY18 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SMC5Q8IY18 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SMC5Q8IY18 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SMC5Q8IY18 AC127496.7-201ENST00000625110 1798 ntBASIC27.71■■■□□ 2.03
SMC5Q8IY18 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
SMC5Q8IY18 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
SMC5Q8IY18 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
SMC5Q8IY18 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.03
SMC5Q8IY18 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SMC5Q8IY18 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.7■■■□□ 2.02
SMC5Q8IY18 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.7■■■□□ 2.02
SMC5Q8IY18 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC27.7■■■□□ 2.02
SMC5Q8IY18 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
SMC5Q8IY18 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC27.69■■■□□ 2.02
SMC5Q8IY18 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SMC5Q8IY18 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.69■■■□□ 2.02
SMC5Q8IY18 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.69■■■□□ 2.02
SMC5Q8IY18 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SMC5Q8IY18 LINC00526-201ENST00000581067 1875 ntBASIC27.69■■■□□ 2.02
SMC5Q8IY18 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.69■■■□□ 2.02
SMC5Q8IY18 AC009102.2-201ENST00000606772 1639 ntBASIC27.69■■■□□ 2.02
SMC5Q8IY18 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
SMC5Q8IY18 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SMC5Q8IY18 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SMC5Q8IY18 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
SMC5Q8IY18 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
SMC5Q8IY18 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SMC5Q8IY18 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMC5Q8IY18 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.68■■■□□ 2.02
SMC5Q8IY18 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.68■■■□□ 2.02
SMC5Q8IY18 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMC5Q8IY18 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMC5Q8IY18 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMC5Q8IY18 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
SMC5Q8IY18 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SMC5Q8IY18 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMC5Q8IY18 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMC5Q8IY18 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMC5Q8IY18 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SMC5Q8IY18 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
SMC5Q8IY18 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.67■■■□□ 2.02
SMC5Q8IY18 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SMC5Q8IY18 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
SMC5Q8IY18 DUX4L4-201ENST00000566884 1269 ntBASIC27.67■■■□□ 2.02
SMC5Q8IY18 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SMC5Q8IY18 AC087742.1-201ENST00000575880 1738 ntBASIC27.67■■■□□ 2.02
SMC5Q8IY18 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC27.66■■■□□ 2.02
SMC5Q8IY18 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SMC5Q8IY18 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.66■■■□□ 2.02
SMC5Q8IY18 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms